HNRNPCL1

General Information

Gene Name       : HNRNPCL1
Gene ID             : ENSG00000179172.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HNRNPCL1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HNRNPCL1ENSG00000179172.90.000.000.00ENCSR000AEF
HepG2HNRNPCL1ENSG00000179172.90.000.000.00ENCSR985KAT
K562HNRNPCL1ENSG00000179172.90.000.000.00ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
RNA Bind-n-SeqRBNS: HNRNPCL1ENCSR915CDTHNRNPCL1cell-free sampleReleasedENCSR122MVN  






  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
HNRNPCL1293TshRNABG293LV04-31,BG293LV04-32BG293LV04-1,BG293LV04-2NotSatisfiedENCORE2
HNRNPCL1293TshRNAHNRNPCL1-BG293LV04-33,HNRNPCL1-BG293LV04-34NT-BG293LV04-1,NT-BG293LV04-2,SubmittingENCORE2
HNRNPCL1293TshRNAHNRNPCL1-BG293LV06-123B,HNRNPCL1-BG293LV06-124BNT-BG293LV06-1B,NT-BG293LV06-2B,SequencedENCORE2


  RNA Bind-n-Seqn  
  GeneName    gene_aliases    Status    Project    Note  
HNRNPCL1HNRNPCL1ReleasedENCODE3


  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HNRNPCL1 is not avaliable on ENCORE database.


  • The binding motifs of HNRNPCL1

    • Trulli

Proteins bound to RNA

  • NO known proteins bind on HNRNPCL1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for HNRNPCL1 is not avaliable on ENCORE database.






NO known proteins are bound to HNRNPCL1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for HNRNPCL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HNRNPCL1 is not available on ENCORE database.

  • No RBPs affect the gene expression of HNRNPCL1 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for HNRNPCL1 is not available on ENCORE database.






No RBPs affect the gene expression of HNRNPCL1 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for HNRNPCL1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of HNRNPCL1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HNRNPCL1 is not avaliable on ENCORE database.