UPF1


Experiment Information     
  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
UPF1465K562ENCSR456ASBENCSR461LGWENCAB730BOORN108PW1ReleasedENCODE3
UPF1726HepG2ENCSR539BEVENCSR042RCUENCAB730BOORN108PW1ReleasedENCODE4


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
UPF1ENCAB730BOORN108PW1Released, ENCODE3Released, ENCODE3BGHLV33-33, Released, ENCODE3BGKLV34-43, Released, ENCODE3
UPF112040S3Released, ENCODE3Submitted, ENCORE2BGHLV33-33, Released, ENCODE3BGKLV34-43, Submitted, ENCORE2


   KD RNA-Seq   
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
UPF1K562shRNAENCSR251ABPENCSR174OYCUPF1_BGKLV34-43,UPF1_BGKLV34-44NT_BGKLV34-1,NT_BGKLV34-266.6,53.2ReleasedENCODE3
UPF1K562shRNABGKLV34-45,BGKLV34-46BGKLV34-1,BGKLV34-2NotSatisfiedENCODE3
UPF1HepG2shRNAENCSR689MIYENCSR691IVRUPF1_BGHLV33-33,UPF1_BGHLV33-34NT_BGHLV33-1,NT_BGHLV33-251.6,67.3ReleasedENCODE3


   RNA Bind-n-Seqn   

No RBNS experiment available



   Localization Image in HepG2   
    UPF1: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Mutually Exclusive from Nucleolus
  • Cytoplasm
  • Compartment/Organelle
  • Unknown Cyto Foci
  • Cytosolic
  • Mitotic-Apparatus (Spindle; Centrosomes)




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