UPK3B

General Information

Gene Name : UPK3B
Gene ID : ENSG00000243566.6
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: UPK3B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	UPK3B	ENSG00000243566.6	0.00	0.03	0.01	ENCSR000AEF
HepG2	UPK3B	ENSG00000243566.6	0.02	0.00	0.01	ENCSR985KAT
K562	UPK3B	ENSG00000243566.6	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for UPK3B is not avaliable on ENCORE database.

Proteins bound to RNA

UPK3B RNA is bound by 45 proteins.

CanvasJS.com

eCLIP assay for UPK3B is not avaliable on ENCORE database.

45 proteins are bound to UPK3B RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	76178681	76178779	+	intron-Distal	4.76113	27.87942	HepG2	NCBP2
chr7	76628191	76628292	+	intron-Distal	6.80011	27.43831	HepG2	FAM120A
chr7	76626722	76626899	+	intron-Distal	7.37499	27.43779	K562	EIF4G2
chr7	76188664	76188730	+	intron-Distal	4.83639	27.37065	HepG2	HNRNPL
chr7	76626751	76626898	+	intron-Distal	6.78610	25.89585	HepG2	FAM120A
chr7	76188851	76188916	+	intron-Distal	3.98662	25.64275	HepG2	HNRNPL
chr7	76191966	76192029	+	intron-Distal	6.45677	21.90835	K562	HNRNPM
chr7	76188916	76188964	+	intron-Distal	4.61865	21.34040	HepG2	HNRNPL
chr7	76216946	76217017	+	intron-Distal	4.06534	20.94332	HepG2	SUGP2
chr7	76189002	76189052	+	intron-Distal	4.03115	20.03487	K562	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 265 entries

eCLIP assay for UPK3B is not avaliable on ENCORE database.

Summary

Diffrential Expression

The Knockdown/knockout assay for UPK3B is not available on ENCORE database.
No RBPs affect the gene expression of UPK3B on ENCORE database.

UPK3B

General Information

Functions

Localization

Domains (AlphaFold: UPK3B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for UPK3B is not avaliable on ENCORE database.

45 proteins are bound to UPK3B RNA:

eCLIP assay for UPK3B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for UPK3B is not available on ENCORE database.

No RBPs affect the gene expression of UPK3B on ENCORE database.

The Knockdown/knockout RNA-Seq assay for UPK3B is not available on ENCORE database.

No RBPs affect the alternative splcing events of UPK3B on ENCORE database.

The Knockdown/knockout RNA-Seq assay for UPK3B is not avaliable on ENCORE database.