TRIM15

General Information

Gene Name       : TRIM15
Gene ID             : ENSG00000204610.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TRIM15)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRIM15ENSG00000204610.120.000.000.00ENCSR000AEF
HepG2TRIM15ENSG00000204610.1219.3011.7915.54ENCSR985KAT
K562TRIM15ENSG00000204610.120.880.470.68ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TRIM15 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TRIM15 RNA is bound by 8 proteins.  







eCLIP assay for TRIM15 is not avaliable on ENCORE database.





8 proteins are bound to TRIM15 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr63013838730138436+CDS,intron-Distal,intron-Proximal3.984727.83009HepG2PRPF8
chr63013699530137080+CDS,intron-Distal,intron-Proximal3.321515.29557HepG2AQR
chr63013973330139808+CDS,intron-Distal4.013755.76695HepG2RBM15
chr63013985530139879+CDS,intron-Distal3.760343.38114HepG2GRWD1
chr63013984130139888+CDS,intron-Distal3.708605.60389HepG2PPIG
chr63013496730135012+CDS,intron-Distal3.606214.22917HepG2PPIG
chr63013607830136155+CDS,intron-Distal3.337606.24463HepG2GRWD1
chr63013174630131792+CDS,intron-Proximal4.119483.14999HepG2GRWD1
chr63013874430138818+CDS,intron-Distal,intron-Proximal3.854229.39957HepG2PRPF8
chr63013828830138380+CDS,intron-Distal4.0109012.11762HepG2PPIG
chr63013982330139889+CDS,intron-Distal6.0489514.91639HepG2RBM15
chr63013822830138286+CDS,intron-Distal,intron-Proximal5.414427.86715HepG2SF3A3
chr63013622930136290+CDS,intron-Distal3.591508.85042HepG2GRWD1
chr63013495330135005+CDS,intron-Distal3.114895.54854HepG2GRWD1
chr63013637930136454+intron-Distal,intron-Proximal5.878179.35430HepG2EFTUD2
chr63013842630138553+intron-Distal,intron-Proximal4.310644.10192HepG2HNRNPK
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TRIM15 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TRIM15 is not available on ENCORE database.

  • 102 RBPs can affect the levels of TRIM15.  








The Knockdown/knockout RNA-Seq assay for TRIM15 is not available on ENCORE database.





102 RBPs can affect the gene expression of TRIM15 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRIM15ENSG00000204610.8198.19430333.04200-0.748804.546103.20450HepG2AATF
TRIM15ENSG00000204610.8255.16690530.97000-1.057208.761507.22580HepG2ABCF1
TRIM15ENSG00000204610.8120.12350503.52890-2.0676045.2753043.56400HepG2ACO1
TRIM15ENSG00000204610.8174.763601230.76420-2.8161055.2723053.37740HepG2AKAP1
TRIM15ENSG00000204610.8338.76190648.98190-0.937908.629306.89990HepG2AKAP8
TRIM15ENSG00000204610.8668.069601018.29340-0.608105.414104.33220HepG2ASCC1
TRIM15ENSG00000204610.8589.47710840.25910-0.511403.958403.16450HepG2AUH
TRIM15ENSG00000204610.8417.86840260.392700.682302.533501.67220HepG2BCLAF1
TRIM15ENSG00000204610.8323.52440597.82710-0.885906.742805.20220HepG2CCAR1
TRIM15ENSG00000204610.8402.68210503.42300-0.322102.330901.71240HepG2CKAP4
TRIM15ENSG00000204610.8474.89840744.71400-0.649103.299802.45830HepG2CNOT7
TRIM15ENSG00000204610.8808.87650481.127900.749408.508807.49920HepG2CELF1
TRIM15ENSG00000204610.8965.83840517.358600.9005020.5050018.83470HepG2DAZAP1
TRIM15ENSG00000204610.8249.26330359.50350-0.528302.795801.87670HepG2DDX24
TRIM15ENSG00000204610.8507.087401178.84880-1.2171018.5727017.10310HepG2DDX3X
TRIM15ENSG00000204610.8351.46490481.74160-0.454903.398102.65800HepG2DKC1
TRIM15ENSG00000204610.8578.03770296.250400.9642016.4690015.00530HepG2DNAJC2
TRIM15ENSG00000204610.8348.33920523.26410-0.587003.834202.76250HepG2EEF2
TRIM15ENSG00000204610.8292.25600436.14020-0.577603.707902.41500HepG2EFTUD2
TRIM15ENSG00000204610.8212.36670424.72640-1.000008.269106.78330HepG2EIF3D
TRIM15ENSG00000204610.8548.749801075.66340-0.9710011.202509.94540HepG2EIF4A3
TRIM15ENSG00000204610.8357.200101047.59030-1.5523017.2740015.65360HepG2EIF4B
TRIM15ENSG00000204610.8648.34380488.917500.407102.482401.70930HepG2EIF4G2
TRIM15ENSG00000204610.8299.04360459.92490-0.621004.312002.97760HepG2ESF1
TRIM15ENSG00000204610.8368.01440964.83270-1.3905015.8886014.64300HepG2ETF1
TRIM15ENSG00000204610.8354.10040492.04080-0.474603.292402.38200HepG2EWSR1
TRIM15ENSG00000204610.8195.58320536.14260-1.4548015.1279013.56890HepG2FIP1L1
TRIM15ENSG00000204610.8218.32170344.18890-0.656703.154401.96150HepG2FUS
TRIM15ENSG00000204610.8644.018201085.74480-0.753504.168103.33150HepG2FXR1
TRIM15ENSG00000204610.8365.941601006.95320-1.4603021.9647020.16830HepG2G3BP1
TRIM15ENSG00000204610.8746.389801069.31610-0.518704.356203.22780HepG2G3BP2
TRIM15ENSG00000204610.8185.12030378.14990-1.030508.000606.51540HepG2GEMIN5
TRIM15ENSG00000204610.8279.57280185.660200.590501.912701.37450HepG2GPKOW
TRIM15ENSG00000204610.81025.73780615.415400.736906.277604.09700HepG2HNRNPAB
TRIM15ENSG00000204610.8487.77650335.627100.539302.574701.90370HepG2HNRNPC
TRIM15ENSG00000204610.8518.61000251.348301.0449015.5313014.01150HepG2HNRNPF
TRIM15ENSG00000204610.8339.019501020.17840-1.5894023.8335021.98040HepG2HNRNPK
TRIM15ENSG00000204610.8637.99510471.282500.436904.262603.43900HepG2HNRNPL
TRIM15ENSG00000204610.8145.52240369.88850-1.3458014.4826012.59260HepG2HNRNPM
TRIM15ENSG00000204610.8530.91290247.507701.100903.633902.81340HepG2IGF2BP1
TRIM15ENSG00000204610.8514.859201023.46250-0.9912012.7875011.45780HepG2IGF2BP2
TRIM15ENSG00000204610.8490.42180960.81120-0.970204.137202.93780HepG2IGF2BP3
TRIM15ENSG00000204610.8579.94100340.563600.767907.809506.64360HepG2ILF2
TRIM15ENSG00000204610.8260.83430631.45690-1.2756013.0929011.31670HepG2LARP4
TRIM15ENSG00000204610.8279.10590379.94860-0.445002.527101.44570HepG2LARP7
TRIM15ENSG00000204610.8818.128001086.12580-0.408802.838502.17530HepG2MAGOH
TRIM15ENSG00000204610.8707.901301092.13230-0.625505.157204.32070HepG2MATR3
TRIM15ENSG00000204610.8128.93350444.48090-1.7855013.6252011.45250HepG2METAP2
TRIM15ENSG00000204610.8273.91320433.87610-0.663604.847203.79700HepG2MSI2
TRIM15ENSG00000204610.8800.805301117.79920-0.481103.533002.82130HepG2NCBP2
TRIM15ENSG00000204610.8335.03570513.01020-0.614702.965202.17620HepG2NOL12
TRIM15ENSG00000204610.8663.46140270.852301.292408.147806.22920HepG2NONO
TRIM15ENSG00000204610.8711.96470995.20250-0.483202.438001.75640HepG2PABPC4
TRIM15ENSG00000204610.8175.71240330.00730-0.909308.291306.95160HepG2PARN
TRIM15ENSG00000204610.81514.63610990.802100.6122011.9471010.82750HepG2PCBP1
TRIM15ENSG00000204610.8182.83060325.80560-0.833504.522203.21780HepG2PCBP2
TRIM15ENSG00000204610.8470.78040297.371700.662706.384205.29760HepG2PPIL4
TRIM15ENSG00000204610.8248.31080373.65680-0.589604.601403.63030HepG2PRPF4
TRIM15ENSG00000204610.8209.71760342.48410-0.707603.387502.04880HepG2PRPF6
TRIM15ENSG00000204610.8668.11580519.834700.361903.315202.67840HepG2PUM1
TRIM15ENSG00000204610.8966.50460512.877400.9141020.0828018.69660HepG2PUS1
TRIM15ENSG00000204610.8420.646001091.93590-1.3762030.5391028.81120HepG2QKI
TRIM15ENSG00000204610.8227.93330485.76870-1.091705.107003.98560HepG2RBM15
TRIM15ENSG00000204610.8257.32680806.40020-1.6479020.0111018.87860HepG2RBM22
TRIM15ENSG00000204610.8277.705501121.99100-2.0144058.5782056.85820HepG2NELFE
TRIM15ENSG00000204610.8772.154401044.90460-0.436404.479103.71920HepG2RECQL
TRIM15ENSG00000204610.8137.83280413.32550-1.5844020.2656018.83780HepG2RPS19
TRIM15ENSG00000204610.8460.52210748.33080-0.700403.661802.74220HepG2RPS3A
TRIM15ENSG00000204610.8311.84220431.33820-0.468002.772601.69800HepG2RPS5
TRIM15ENSG00000204610.8573.49210296.909900.9496014.6647013.35770HepG2SAFB2
TRIM15ENSG00000204610.8211.75390414.76050-0.969908.696007.05620HepG2SERBP1
TRIM15ENSG00000204610.8250.82220520.70490-1.053805.078904.14600HepG2SF3A3
TRIM15ENSG00000204610.8321.70360175.355100.875405.586304.61230HepG2SF3B1
TRIM15ENSG00000204610.8731.133701049.68240-0.521705.464804.68200HepG2SF3B4
TRIM15ENSG00000204610.8734.97270469.532400.646409.275908.11110HepG2SLBP
TRIM15ENSG00000204610.8268.33070346.23990-0.367802.246501.65740HepG2SMN1
TRIM15ENSG00000204610.8550.96180320.832600.780005.449604.07360HepG2SMNDC1
TRIM15ENSG00000204610.8559.16160306.206300.868706.631504.12710HepG2SND1
TRIM15ENSG00000204610.8108.50420195.12050-0.846601.968101.31330HepG2SNRNP70
TRIM15ENSG00000204610.8368.09740910.76140-1.3070015.4261014.49630HepG2SRFBP1
TRIM15ENSG00000204610.8529.645401095.60350-1.0486024.9838023.87350HepG2SRSF1
TRIM15ENSG00000204610.8755.19960246.936601.6126039.4336037.44010HepG2SRSF7
TRIM15ENSG00000204610.8403.03920790.69040-0.9722010.087809.22630HepG2SSB
TRIM15ENSG00000204610.8882.09810651.145300.437902.526501.48220HepG2STIP1
TRIM15ENSG00000204610.8333.60140549.88410-0.721008.877807.87050HepG2SUCLG1
TRIM15ENSG00000204610.8181.43790293.37000-0.693202.094801.49530HepG2SUPV3L1
TRIM15ENSG00000204610.8449.39380984.66650-1.1317024.3939022.95710HepG2TAF15
TRIM15ENSG00000204610.8363.16970172.790701.071506.338305.30090HepG2TARDBP
TRIM15ENSG00000204610.8318.86510691.54310-1.116906.436704.88450HepG2TBRG4
TRIM15ENSG00000204610.8671.82910904.88540-0.429604.037203.03320HepG2TIA1
TRIM15ENSG00000204610.8217.52830323.94030-0.574503.602603.04800HepG2TIAL1
TRIM15ENSG00000204610.8495.84060315.735200.651103.458201.82780HepG2TRA2A
TRIM15ENSG00000204610.8422.78180326.865600.371102.431601.89600HepG2TRIM56
TRIM15ENSG00000204610.8290.18910445.83380-0.619502.791202.19220HepG2UTP3
TRIM15ENSG00000204610.8194.10910345.76040-0.832904.719803.35420HepG2XRCC6
TRIM15ENSG00000204610.8443.04570288.792400.617302.378101.70130HepG2XRN2
TRIM15ENSG00000204610.8149.84380368.74220-1.2992016.6174015.20310HepG2ZC3H8
TRIM15ENSG00000204610.8542.25160314.168000.787305.506403.60330HepG2ZRANB2
TRIM15ENSG00000204610.86.5726027.96230-2.088902.387801.83640K562AQR
TRIM15ENSG00000204610.891.7969031.735201.532305.455603.87250K562MSI2
TRIM15ENSG00000204610.834.9208011.084501.655403.092902.39500K562PTBP1
TRIM15ENSG00000204610.86.9969034.54290-2.303604.053202.74090K562PUM1
TRIM15ENSG00000204610.848.2729019.965801.273602.507701.61140K562SRPK2
TRIM15ENSG00000204610.824.924305.337202.223302.468201.51240K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRIM15 is not available on ENCORE database.





8 RBPs can affect the splicing of TRIM15 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETRIM15ENSG00000204610.8chr6+301387523013878530138277301383933013960830140473-0.592000.000000.00000excludedHepG2U2AF2
SETRIM15ENSG00000204610.8chr6+3013875230138785301382773013839330139608301404730.097000.000570.03276includedHepG2PTBP1
SETRIM15ENSG00000204610.8chr6+301387523013878530138277301383933013960830140473-0.155000.000090.00661excludedHepG2SF3B4
SETRIM15ENSG00000204610.8chr6+3013875230138785301382773013839330139608301404730.120000.000390.08251includedHepG2FUBP3
A5SSTRIM15ENSG00000204610.8chr6+301360763013630730136076301362933013701730137040-0.079000.000070.02102shorterHepG2DDX3X
A5SSTRIM15ENSG00000204610.8chr6+3013607630136307301360763013629330137017301370400.105000.000120.07273longerHepG2PPIG
A5SSTRIM15ENSG00000204610.8chr6+3013607630136307301360763013629330137017301370400.125000.000010.00630longerHepG2TBRG4
A5SSTRIM15ENSG00000204610.8chr6+301360763013630730136076301362933013701730137040-0.067000.000300.06241shorterHepG2DDX6

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TRIM15 is not avaliable on ENCORE database.