TERF2

General Information

Gene Name : TERF2
Gene ID : ENSG00000132604.10
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TERF2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TERF2	ENSG00000132604.10	28.49	32.31	30.40	ENCSR000AEF
HepG2	TERF2	ENSG00000132604.10	21.32	37.59	29.46	ENCSR985KAT
K562	TERF2	ENSG00000132604.10	31.83	38.10	34.97	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TERF2 is not avaliable on ENCORE database.

Proteins bound to RNA

TERF2 RNA is bound by 20 proteins.

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eCLIP assay for TERF2 is not avaliable on ENCORE database.

20 proteins are bound to TERF2 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	69419684	69419787	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.03044	21.62907	HepG2	PRPF4
chr16	69419346	69419452	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	5.13191	16.14488	HepG2	EFTUD2
chr16	69419193	69419293	-	intron-Distal,intron-Proximal	6.61955	14.81397	K562	AQR
chr16	69419656	69419788	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.37702	14.13897	HepG2	GTF2F1
chr16	69419337	69419453	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.68137	10.82062	K562	AQR
chr16	69419586	69419773	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.33200	10.68100	HepG2	PCBP2
chr16	69419403	69419477	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.70615	10.32702	HepG2	AQR
chr16	69419394	69419456	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.28052	10.27121	K562	EFTUD2
chr16	69419593	69419677	-	CDS,intron-Distal,intron-Proximal	3.44273	9.61680	HepG2	PRPF4
chr16	69419396	69419469	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.39678	9.55950	HepG2	PRPF4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 49 entries

eCLIP assay for TERF2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TERF2 is not available on ENCORE database.
49 RBPs can affect the levels of TERF2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TERF2 is not available on ENCORE database.

49 RBPs can affect the gene expression of TERF2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TERF2	ENSG00000132604.6	2356.90720	1373.29280	0.77920	19.06140	17.50140	K562	DDX47
TERF2	ENSG00000132604.6	958.88380	517.73450	0.88900	16.06080	14.71010	K562	FXR1
TERF2	ENSG00000132604.6	1135.68900	733.52490	0.63050	11.07270	10.00300	HepG2	UTP3
TERF2	ENSG00000132604.6	1147.47040	647.98370	0.82430	8.60100	7.14600	K562	RPS19
TERF2	ENSG00000132604.6	1350.65590	778.50810	0.79480	7.89710	7.04910	HepG2	AKAP1
TERF2	ENSG00000132604.6	814.77820	497.84390	0.71060	7.77850	6.40200	K562	EIF4A3
TERF2	ENSG00000132604.6	1047.75440	729.68080	0.52190	6.64000	5.86300	HepG2	NELFE
TERF2	ENSG00000132604.6	1741.98050	1183.73610	0.55730	5.66020	4.87200	K562	AQR
TERF2	ENSG00000132604.6	1057.99840	686.88210	0.62310	5.64820	4.72210	HepG2	MAGOH
TERF2	ENSG00000132604.6	787.17070	576.35040	0.44960	5.46820	4.59300	HepG2	CKAP4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 56 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TERF2 is not available on ENCORE database.

11 RBPs can affect the splicing of TERF2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	TERF2	ENSG00000132604.6	chr16	-	69404436	69404647	69404436	69404532	69406171	69406258	0.18800	0.00000	0.00011	longer	K562	HNRNPU
A3SS	TERF2	ENSG00000132604.6	chr16	-	69406171	69406357	69406171	69406258	69418482	69418613	0.13000	0.00000	0.00000	longer	K562	AQR
SE	TERF2	ENSG00000132604.6	chr16	-	69404385	69404532	69402278	69402385	69418482	69418613	-0.30900	0.00001	0.00015	excluded	K562	AQR
SE	TERF2	ENSG00000132604.6	chr16	-	69402489	69402498	69402278	69402385	69404385	69404532	0.31500	0.00001	0.00108	included	HepG2	SRSF9
A3SS	TERF2	ENSG00000132604.6	chr16	-	69402278	69402498	69402278	69402385	69404385	69404532	-0.17500	0.00001	0.00039	shorter	HepG2	U2AF2
A3SS	TERF2	ENSG00000132604.6	chr16	-	69402278	69402498	69402278	69402385	69404385	69404532	-0.14600	0.00002	0.00342	shorter	HepG2	HNRNPK
A3SS	TERF2	ENSG00000132604.6	chr16	-	69404436	69404647	69404436	69404532	69406171	69406258	0.22300	0.00003	0.00210	longer	K562	PUS1
A3SS	TERF2	ENSG00000132604.6	chr16	-	69404436	69404647	69404436	69404532	69406171	69406258	0.18800	0.00003	0.00557	longer	K562	RBM15
A3SS	TERF2	ENSG00000132604.6	chr16	-	69404436	69404647	69404436	69404532	69406171	69406258	0.21800	0.00004	0.00631	longer	K562	AGGF1
A3SS	TERF2	ENSG00000132604.6	chr16	-	69402278	69402498	69402278	69402385	69404385	69404532	0.23200	0.00004	0.02003	longer	HepG2	SRSF9

Showing 1 to 10 of 20 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TERF2

General Information

Functions

Localization

Domains (AlphaFold: TERF2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TERF2 is not avaliable on ENCORE database.

20 proteins are bound to TERF2 RNA:

eCLIP assay for TERF2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TERF2 is not available on ENCORE database.

49 RBPs can affect the gene expression of TERF2 :

The Knockdown/knockout RNA-Seq assay for TERF2 is not available on ENCORE database.

11 RBPs can affect the splicing of TERF2 :

The Knockdown/knockout RNA-Seq assay for TERF2 is not avaliable on ENCORE database.