TCTEX1D2

General Information

Gene Name : TCTEX1D2
Gene ID : ENSG00000213123.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TCTEX1D2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TCTEX1D2	ENSG00000213123.10	3.81	11.34	7.58	ENCSR000AEF
HepG2	TCTEX1D2	ENSG00000213123.10	3.30	2.23	2.76	ENCSR985KAT
K562	TCTEX1D2	ENSG00000213123.10	6.39	4.99	5.69	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TCTEX1D2 is not avaliable on ENCORE database.

Proteins bound to RNA

TCTEX1D2 RNA is bound by 9 proteins.

eCLIP assay for TCTEX1D2 is not avaliable on ENCORE database.

9 proteins are bound to TCTEX1D2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	196045072	196045153	-	5'-UTR,intron-Distal,intron-Proximal	3.94995	3.31905	K562	NONO
chr3	196043779	196043824	-	intron-Distal	4.57638	4.07596	K562	GTF2F1
chr3	196043972	196044011	-	intron-Distal	5.27326	25.64927	K562	AGGF1
chr3	196044732	196044811	-	intron-Distal	3.31367	4.23595	K562	AKAP8L
chr3	196043658	196043685	-	intron-Distal	6.56578	25.94945	HepG2	HNRNPL
chr3	196044149	196044193	-	intron-Distal	5.68080	13.73667	K562	HNRNPL
chr3	196044618	196044671	-	intron-Distal	4.89391	25.61916	K562	AGGF1
chr3	196044036	196044079	-	intron-Distal	4.90033	11.42320	HepG2	HNRNPL
chr3	196044733	196044790	-	intron-Distal	4.09194	4.32762	K562	GEMIN5
chr3	196043761	196043827	-	intron-Distal	6.12488	42.75942	K562	HNRNPL
chr3	196044829	196044888	-	intron-Distal	4.30785	3.08079	HepG2	AGGF1
chr3	196044713	196044816	-	intron-Distal	4.06064	3.70701	HepG2	PRPF4
chr3	196043765	196043828	-	intron-Distal	5.68285	55.19268	K562	AGGF1
chr3	196044556	196044618	-	intron-Distal	5.29606	31.03421	K562	AGGF1
chr3	196044840	196044898	-	intron-Distal	3.74536	3.14687	K562	CSTF2T
chr3	196043685	196043708	-	intron-Distal	6.46477	23.99670	HepG2	HNRNPL
chr3	196044437	196044472	-	intron-Distal	6.25183	18.94406	K562	AGGF1
chr3	196044558	196044613	-	intron-Distal	4.91512	8.39842	K562	HNRNPL
chr3	196043657	196043709	-	intron-Distal	6.06588	40.44139	K562	HNRNPL
chr3	196044153	196044179	-	intron-Distal	4.83864	6.36545	HepG2	HNRNPL
chr3	196043559	196043601	-	intron-Distal	5.54975	22.59548	K562	AGGF1
chr3	196044144	196044189	-	intron-Distal	4.53041	4.95161	K562	GTF2F1
chr3	196043361	196043388	-	intron-Distal	6.05081	14.30686	K562	AGGF1
chr3	196043638	196043708	-	intron-Distal	7.52055	77.83592	K562	AGGF1
chr3	196043783	196043828	-	intron-Distal	5.24833	14.10108	HepG2	HNRNPL
chr3	196044548	196044689	-	intron-Distal	3.96289	6.54942	K562	NONO
chr3	196043974	196043984	-	intron-Distal	4.84070	6.37635	HepG2	HNRNPL
chr3	196044432	196044484	-	intron-Distal	4.17461	3.60879	K562	HNRNPL
chr3	196044613	196044664	-	intron-Distal	4.99154	8.57115	K562	HNRNPL
chr3	196044036	196044068	-	intron-Distal	4.42938	4.49526	HepG2	AGGF1
chr3	196043896	196043957	-	intron-Distal	4.10136	6.38153	HepG2	AGGF1
chr3	196043769	196043827	-	intron-Distal	3.14380	4.81996	HepG2	AGGF1
chr3	196043896	196043969	-	intron-Distal	4.48018	25.72839	HepG2	HNRNPL
chr3	196044731	196044887	-	intron-Distal	3.62309	4.66361	K562	XRN2
chr3	196044849	196044882	-	intron-Distal	6.24339	15.84732	K562	AGGF1
chr3	196044755	196044879	-	intron-Distal	4.43536	5.25929	HepG2	GTF2F1
chr3	196044749	196044829	-	intron-Distal	5.43274	36.02675	K562	AGGF1
chr3	196043786	196043836	-	intron-Distal	3.54338	5.92430	K562	AKAP8L
chr3	196044618	196044687	-	intron-Distal	3.06860	3.50009	K562	CSTF2T
chr3	196043653	196043697	-	intron-Distal	4.17900	8.36566	HepG2	AGGF1
chr3	196044716	196044829	-	intron-Distal	3.62554	8.20573	HepG2	AGGF1
chr3	196044576	196044673	-	intron-Distal	3.85386	6.03664	K562	GTF2F1
chr3	196043662	196043702	-	intron-Distal	3.66416	4.10368	K562	AKAP8L
chr3	196043523	196043554	-	intron-Distal	5.25043	9.43003	K562	HNRNPL
chr3	196044841	196044889	-	intron-Distal	4.49154	6.18384	K562	HNRNPL
chr3	196044034	196044072	-	intron-Distal	5.90765	22.33763	K562	AGGF1
chr3	196044752	196044786	-	intron-Distal	4.75667	4.46189	K562	GTF2F1
chr3	196044594	196044682	-	intron-Distal	3.96738	4.99833	K562	AKAP8L
chr3	196044569	196044626	-	intron-Distal	4.21868	5.66595	HepG2	AGGF1
chr3	196043510	196043559	-	intron-Distal	5.66108	25.77169	K562	AGGF1
chr3	196043910	196043954	-	intron-Distal	4.24203	15.45634	K562	HNRNPL
chr3	196043652	196043699	-	intron-Distal	5.28640	6.02367	K562	GTF2F1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for TCTEX1D2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TCTEX1D2 is not available on ENCORE database.
27 RBPs can affect the levels of TCTEX1D2.

The Knockdown/knockout RNA-Seq assay for TCTEX1D2 is not available on ENCORE database.

27 RBPs can affect the gene expression of TCTEX1D2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TCTEX1D2	ENSG00000213123.6	102.41400	33.04060	1.63200	5.24210	4.53910	HepG2	AKAP1
TCTEX1D2	ENSG00000213123.6	36.28420	13.52290	1.42380	2.26520	1.31700	HepG2	AKAP8
TCTEX1D2	ENSG00000213123.6	16.45170	39.57500	-1.26630	2.29600	1.70110	HepG2	CELF1
TCTEX1D2	ENSG00000213123.6	57.18790	22.86740	1.32230	2.97190	2.27180	HepG2	DDX21
TCTEX1D2	ENSG00000213123.6	64.13080	31.64420	1.01900	2.07250	1.52250	HepG2	DDX3X
TCTEX1D2	ENSG00000213123.6	56.75240	27.19770	1.06110	1.97940	1.44970	HepG2	DDX6
TCTEX1D2	ENSG00000213123.6	61.05350	29.15100	1.06640	2.16170	1.54660	HepG2	FXR1
TCTEX1D2	ENSG00000213123.6	17.88670	38.77310	-1.11620	1.91230	1.33900	HepG2	HNRNPL
TCTEX1D2	ENSG00000213123.6	68.73670	29.16130	1.23690	3.00560	2.32280	HepG2	MAGOH
TCTEX1D2	ENSG00000213123.6	8.27830	40.28450	-2.28280	4.53810	3.79620	HepG2	PUF60
TCTEX1D2	ENSG00000213123.6	10.09440	27.99060	-1.47140	1.89200	1.32500	HepG2	RBM25
TCTEX1D2	ENSG00000213123.6	87.65280	31.69320	1.46750	4.77230	4.09670	HepG2	NELFE
TCTEX1D2	ENSG00000213123.6	56.01870	22.27120	1.33060	2.74430	1.94640	HepG2	RPS2
TCTEX1D2	ENSG00000213123.6	9.62250	27.88230	-1.53490	2.15440	1.57360	HepG2	SAFB2
TCTEX1D2	ENSG00000213123.6	71.97570	30.94670	1.21760	3.11940	2.62540	HepG2	SRSF1
TCTEX1D2	ENSG00000213123.6	78.63950	45.23430	0.79770	1.95090	1.41190	HepG2	SUCLG1
TCTEX1D2	ENSG00000213123.6	1.98720	20.02330	-3.33290	2.63140	1.66930	HepG2	U2AF2
TCTEX1D2	ENSG00000213123.6	3.91620	18.07460	-2.20640	2.07680	1.41890	HepG2	UCHL5
TCTEX1D2	ENSG00000213123.6	89.02480	137.82110	-0.63050	1.87730	1.37640	K562	AQR
TCTEX1D2	ENSG00000213123.6	45.34140	92.48480	-1.02840	2.57980	1.56200	K562	CNOT7
TCTEX1D2	ENSG00000213123.6	97.66030	164.63720	-0.75340	3.06590	2.04050	K562	CELF1
TCTEX1D2	ENSG00000213123.6	110.31170	63.45950	0.79760	2.36640	1.69270	K562	EIF2S2
TCTEX1D2	ENSG00000213123.6	32.40040	79.37620	-1.29270	3.63130	2.19280	K562	HNRNPK
TCTEX1D2	ENSG00000213123.6	129.69240	83.50600	0.63500	2.33040	1.55470	K562	MAGOH
TCTEX1D2	ENSG00000213123.6	84.32200	146.06410	-0.79260	2.98540	2.13660	K562	PUF60
TCTEX1D2	ENSG00000213123.6	25.99500	66.65390	-1.35850	3.63170	2.08120	K562	RBM25
TCTEX1D2	ENSG00000213123.6	39.44560	81.00320	-1.03810	3.08380	2.22320	K562	SF3A3
TCTEX1D2	ENSG00000213123.6	32.14060	73.05910	-1.18470	3.60930	2.62800	K562	SF3B4
TCTEX1D2	ENSG00000213123.6	160.49640	79.52360	1.01300	4.84290	3.91190	K562	SRSF1
TCTEX1D2	ENSG00000213123.6	31.96490	68.12040	-1.09160	2.60280	1.54570	K562	U2AF1
TCTEX1D2	ENSG00000213123.6	26.42040	70.32560	-1.41240	4.21110	3.22360	K562	U2AF2
TCTEX1D2	ENSG00000213123.6	102.58550	164.70570	-0.68310	3.04930	1.56910	K562	UBE2L3
TCTEX1D2	ENSG00000213123.6	92.36550	155.28920	-0.74950	2.69600	1.84590	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TCTEX1D2 is not available on ENCORE database.

1 RBPs can affect the splicing of TCTEX1D2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TCTEX1D2	ENSG00000213123.6	chr3	-	196022876	196022940			196018091	196018245	196033813	196033883	-0.14100	0.00004	0.00070	excluded	K562	AQR
MXE	TCTEX1D2	ENSG00000213123.6	chr3	-	196022876	196022940	196033813	196033883	196018091	196018245	196042968	196043102	0.21700	0.00086	0.00800	1included	K562	AQR
MXE	TCTEX1D2	ENSG00000213123.6	chr3	-	196033813	196033883	196042968	196043102	196018091	196018245	196044910	196045170	-0.18900	0.00366	0.02771	2included	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TCTEX1D2

General Information

Functions

Localization

Domains (AlphaFold: TCTEX1D2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TCTEX1D2 is not avaliable on ENCORE database.

9 proteins are bound to TCTEX1D2 RNA:

eCLIP assay for TCTEX1D2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TCTEX1D2 is not available on ENCORE database.

27 RBPs can affect the gene expression of TCTEX1D2 :

The Knockdown/knockout RNA-Seq assay for TCTEX1D2 is not available on ENCORE database.

1 RBPs can affect the splicing of TCTEX1D2 :

The Knockdown/knockout RNA-Seq assay for TCTEX1D2 is not avaliable on ENCORE database.