LEMD1

General Information

Gene Name : LEMD1
Gene ID : ENSG00000186007.9
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: LEMD1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LEMD1	ENSG00000186007.9	0.00	0.04	0.02	ENCSR000AEF
HepG2	LEMD1	ENSG00000186007.9	1.06	0.29	0.68	ENCSR985KAT
K562	LEMD1	ENSG00000186007.9	0.57	0.79	0.68	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LEMD1 is not avaliable on ENCORE database.

Proteins bound to RNA

LEMD1 RNA is bound by 11 proteins.

CanvasJS.com

eCLIP assay for LEMD1 is not avaliable on ENCORE database.

11 proteins are bound to LEMD1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	205417507	205417552	-	intron-Distal	7.88008	165.60802	HepG2	DGCR8
chr1	205417251	205417320	-	intron-Distal	7.40624	164.22581	HepG2	DGCR8
chr1	205417449	205417507	-	intron-Distal	9.34474	143.46956	HepG2	DGCR8
chr1	205417578	205417598	-	intron-Distal	9.12484	133.97638	HepG2	DGCR8
chr1	205417564	205417578	-	intron-Distal	8.98796	119.93488	HepG2	DGCR8
chr1	205417320	205417329	-	intron-Distal	7.72586	105.30496	HepG2	DGCR8
chr1	205417329	205417361	-	intron-Distal	8.76177	102.90735	HepG2	DGCR8
chr1	205417598	205417623	-	intron-Distal	8.76526	101.24466	HepG2	DGCR8
chr1	205417552	205417564	-	intron-Distal	8.72779	97.66340	HepG2	DGCR8
chr1	205417510	205417631	-	intron-Distal	6.01196	74.28399	HepG2	DROSHA
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 86 entries

eCLIP assay for LEMD1 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for LEMD1 is not available on ENCORE database.
2 RBPs can affect the levels of LEMD1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for LEMD1 is not available on ENCORE database.

2 RBPs can affect the gene expression of LEMD1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LEMD1	ENSG00000186007.5	8.00900	0.00000	99999.99990	2.46070	1.79130	K562	TARDBP
LEMD1	ENSG00000186007.5	6.68800	0.00000	99999.99990	2.15680	1.32140	HepG2	SMNDC1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 2 of 2 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LEMD1

General Information

Functions

Localization

Domains (AlphaFold: LEMD1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LEMD1 is not avaliable on ENCORE database.

11 proteins are bound to LEMD1 RNA:

eCLIP assay for LEMD1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LEMD1 is not available on ENCORE database.

2 RBPs can affect the gene expression of LEMD1 :

The Knockdown/knockout RNA-Seq assay for LEMD1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of LEMD1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for LEMD1 is not avaliable on ENCORE database.