AC002116.7

General Information

Gene Name : AC002116.7
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AC002116.7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AC002116.7 is not avaliable on ENCORE database.

Proteins bound to RNA

AC002116.7 RNA is bound by 10 proteins.

CanvasJS.com

eCLIP assay for AC002116.7 is not avaliable on ENCORE database.

10 proteins are bound to AC002116.7 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	36528256	36528406	+	intron-Distal	5.96075	39.98496	K562	AGGF1
chr19	36528204	36528397	+	intron-Distal	4.61163	17.56859	K562	HNRNPL
chr19	36528187	36528256	+	intron-Distal	4.14882	12.83795	K562	AGGF1
chr19	36517011	36517084	+	intron-Distal	4.29438	9.80960	K562	NONO
chr19	36517821	36517889	+	intron-Distal	3.27462	7.83137	K562	NONO
chr19	36528556	36528587	+	intron-Distal	5.02734	6.56347	K562	AGGF1
chr19	36520549	36520621	+	intron-Distal	4.83359	5.81225	K562	PTBP1
chr19	36526316	36526412	+	intron-Distal	4.43844	5.42636	K562	NONO
chr19	36523860	36523958	+	intron-Distal	4.38130	5.40707	K562	CSTF2T
chr19	36517809	36517888	+	intron-Distal	3.74870	5.40390	K562	EWSR1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 25 entries

eCLIP assay for AC002116.7 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for AC002116.7 is not available on ENCORE database.
5 RBPs can affect the levels of AC002116.7.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for AC002116.7 is not available on ENCORE database.

5 RBPs can affect the gene expression of AC002116.7 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
AC002116.7	ENSG00000267698.1	2.12770	15.97110	-2.90810	2.48960	1.99120	HepG2	RBM22
AC002116.7	ENSG00000267698.1	16.53490	42.37170	-1.35760	2.69180	1.84250	K562	ZC3H8
AC002116.7	ENSG00000267698.1	4.16920	18.03890	-2.11330	2.11100	1.65470	HepG2	SRFBP1
AC002116.7	ENSG00000267698.1	21.19660	46.72970	-1.14050	2.12320	1.34280	K562	MBNL1
AC002116.7	ENSG00000267698.1	15.12730	37.60490	-1.31380	1.80430	1.31030	K562	AQR
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AC002116.7

General Information

Functions

Localization

Domains (AlphaFold: AC002116.7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AC002116.7 is not avaliable on ENCORE database.

10 proteins are bound to AC002116.7 RNA:

eCLIP assay for AC002116.7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AC002116.7 is not available on ENCORE database.

5 RBPs can affect the gene expression of AC002116.7 :

The Knockdown/knockout RNA-Seq assay for AC002116.7 is not available on ENCORE database.

No RBPs affect the alternative splcing events of AC002116.7 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AC002116.7 is not avaliable on ENCORE database.