RP11-527F13.1

General Information

Gene Name : RP11-527F13.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-527F13.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-527F13.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-527F13.1 RNA is bound by 9 proteins.

eCLIP assay for RP11-527F13.1 is not avaliable on ENCORE database.

9 proteins are bound to RP11-527F13.1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	126522828	126522879	+	intron-Distal	4.27869	11.19514	HepG2	PTBP1
chr6	126511641	126511695	+	intron-Distal	4.22125	3.95871	HepG2	ILF3
chr6	126499049	126499113	+	intron-Distal	3.84959	3.06084	HepG2	HNRNPK
chr6	126502425	126502448	+	intron-Distal	4.29481	8.21449	HepG2	RBFOX2
chr6	126522938	126522984	+	intron-Distal	5.48106	11.59253	HepG2	PTBP1
chr6	126514529	126514616	+	intron-Distal	4.11637	10.53796	HepG2	QKI
chr6	126498745	126498802	+	intron-Distal	3.26410	3.64762	HepG2	QKI
chr6	126522813	126522895	+	intron-Distal	4.60956	3.91475	K562	PTBP1
chr6	126502396	126502425	+	intron-Distal	4.41835	10.35072	HepG2	RBFOX2
chr6	126499726	126499793	+	intron-Distal	3.26555	3.46325	HepG2	SUGP2
chr6	126506690	126506772	+	intron-Distal	3.82232	5.07626	HepG2	PTBP1
chr6	126506345	126506405	+	intron-Distal	4.21209	4.51299	HepG2	SUGP2
chr6	126522879	126522938	+	intron-Distal	6.51848	21.75278	HepG2	PTBP1
chr6	126513564	126513615	+	intron-Distal	3.66144	3.68462	HepG2	MATR3
chr6	126514057	126514102	+	intron-Distal	4.76951	5.97584	HepG2	MATR3
chr6	126500370	126500481	+	intron-Distal	4.62865	3.27829	HepG2	MATR3
chr6	126514657	126514706	+	intron-Distal	4.15604	6.30359	HepG2	QKI
chr6	126500412	126500469	+	intron-Distal	3.28325	3.23296	HepG2	SUGP2
chr6	126523159	126523213	+	intron-Proximal	3.66011	5.97243	HepG2	U2AF2
chr6	126523144	126523204	+	intron-Proximal	3.00658	5.20766	HepG2	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-527F13.1 is not avaliable on ENCORE database.

Summary

Diffrential Expression

The Knockdown/knockout assay for RP11-527F13.1 is not available on ENCORE database.
No RBPs affect the gene expression of RP11-527F13.1 on ENCORE database.

RP11-527F13.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-527F13.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-527F13.1 is not avaliable on ENCORE database.

9 proteins are bound to RP11-527F13.1 RNA:

eCLIP assay for RP11-527F13.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-527F13.1 is not available on ENCORE database.

No RBPs affect the gene expression of RP11-527F13.1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-527F13.1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-527F13.1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-527F13.1 is not avaliable on ENCORE database.