RP11-458F8.1

General Information

Gene Name       : RP11-458F8.1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-458F8.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-458F8.1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-458F8.1 RNA is bound by 4 proteins.  







eCLIP assay for RP11-458F8.1 is not avaliable on ENCORE database.





4 proteins are bound to RP11-458F8.1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr76631362766313688+intron-Distal,intron-Proximal4.5612920.92431HepG2PRPF8
chr76631582366315915+intron-Distal3.213834.08064K562KHSRP
chr76631806466318120+intron-Distal3.183463.25288HepG2HNRNPC
chr76631372266313783+intron-Distal4.704435.70555K562PRPF8
chr76632075966320774+intron-Proximal3.370244.61874HepG2HNRNPC
chr76631355666313648+intron-Proximal3.367735.53307K562ZNF622
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-458F8.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-458F8.1 is not available on ENCORE database.

  • No RBPs affect the gene expression of RP11-458F8.1 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for RP11-458F8.1 is not available on ENCORE database.






No RBPs affect the gene expression of RP11-458F8.1 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for RP11-458F8.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-458F8.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-458F8.1 is not avaliable on ENCORE database.