RP11-304L19.3

General Information

Gene Name       : RP11-304L19.3
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-304L19.3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-304L19.3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-304L19.3 RNA is bound by 4 proteins.  







eCLIP assay for RP11-304L19.3 is not avaliable on ENCORE database.





4 proteins are bound to RP11-304L19.3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1621458162145847-intron-Distal5.477477.65756K562DGCR8
chr1621470752147153-3'-UTR,CDS,intron-Distal,intron-Proximal4.2846710.97352HepG2EFTUD2
chr1621470042147116-intron-Distal,intron-Proximal3.7877711.18230K562EFTUD2
chr1621454842145667-intron-Distal3.497314.84707HepG2HNRNPK
chr1621469702147075-intron-Distal,intron-Proximal5.1130139.14858HepG2EFTUD2
chr1621458032145816-intron-Distal4.245845.39571K562DGCR8
chr1621470612147150-3'-UTR,CDS,intron-Distal,intron-Proximal4.005356.42898K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-304L19.3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-304L19.3 is not available on ENCORE database.

  • 1 RBPs can affect the levels of RP11-304L19.3.  








The Knockdown/knockout RNA-Seq assay for RP11-304L19.3 is not available on ENCORE database.





1 RBPs can affect the gene expression of RP11-304L19.3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-304L19.3ENSG00000261123.157.2245020.272601.497003.576002.46640K562PCBP2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-304L19.3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-304L19.3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-304L19.3 is not avaliable on ENCORE database.