MTRNR2L12

General Information

Gene Name       : MTRNR2L12
Gene ID             : ENSG00000269028.3
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MTRNR2L12)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MTRNR2L12ENSG00000269028.30.000.000.00ENCSR000AEF
HepG2MTRNR2L12ENSG00000269028.30.000.060.03ENCSR985KAT
K562MTRNR2L12ENSG00000269028.30.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MTRNR2L12 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MTRNR2L12 RNA is bound by 5 proteins.  







eCLIP assay for MTRNR2L12 is not avaliable on ENCORE database.





5 proteins are bound to MTRNR2L12 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr39633639196336399-5'-UTR4.1037029.66579HepG2NIP7
chr39633639596336399-5'-UTR4.24094400.00000HepG2BCLAF1
chr39633623196336235-5'-UTR4.63378400.00000HepG2BCLAF1
chr39633692996336973-5'-UTR3.234698.32485K562FASTKD2
chr39633635296336358-5'-UTR4.13544400.00000HepG2BCLAF1
chr39633635496336358-5'-UTR3.5263944.21958HepG2NIP7
chr39633638496336395-5'-UTR4.38859400.00000HepG2BCLAF1
chr39633635896336367-5'-UTR4.1161780.17855HepG2NIP7
chr39633642296336435-5'-UTR6.55549400.00000HepG2BCLAF1
chr39633681996336897-5'-UTR3.7330818.51591K562QKI
chr39633643596336462-5'-UTR6.57389400.00000HepG2BCLAF1
chr39633622896336292-5'-UTR4.36116400.00000HepG2NIP7
chr39633625496336293-5'-UTR4.63005400.00000HepG2BCLAF1
chr39633622996336258-5'-UTR3.2539673.53600K562ZNF800
chr39633681496336857-5'-UTR3.2740511.35216HepG2FASTKD2
chr39633625896336293-5'-UTR3.1439880.38162K562ZNF800
chr39633636296336384-5'-UTR4.36026400.00000HepG2BCLAF1
chr39633635896336362-5'-UTR4.32789400.00000HepG2BCLAF1
chr39633635196336354-5'-UTR3.6569536.62954HepG2NIP7
chr39633636796336391-5'-UTR4.2690881.87390HepG2NIP7
chr39633623596336241-5'-UTR4.51135400.00000HepG2BCLAF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MTRNR2L12 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MTRNR2L12 is not available on ENCORE database.

  • 2 RBPs can affect the levels of MTRNR2L12.  








The Knockdown/knockout RNA-Seq assay for MTRNR2L12 is not available on ENCORE database.





2 RBPs can affect the gene expression of MTRNR2L12 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MTRNR2L12ENSG00000269028.214.268000.443605.007203.841302.69370HepG2DHX30
MTRNR2L12ENSG00000269028.211.683600.460204.666003.031302.30050HepG2DNAJC21
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MTRNR2L12 is not available on ENCORE database.






No RBPs affect the alternative splcing events of MTRNR2L12 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for MTRNR2L12 is not avaliable on ENCORE database.