MSH4

General Information

Gene Name : MSH4
Gene ID : ENSG00000057468.6
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MSH4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MSH4	ENSG00000057468.6	0.03	0.03	0.03	ENCSR000AEF
HepG2	MSH4	ENSG00000057468.6	0.00	0.00	0.00	ENCSR985KAT
K562	MSH4	ENSG00000057468.6	0.01	0.00	0.01	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary

RNA Targets

eCLIP assay for MSH4 is not avaliable on ENCORE database.

Proteins bound to RNA

NO known proteins bind on MSH4 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for MSH4 is not avaliable on ENCORE database.

NO known proteins are bound to MSH4 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for MSH4 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for MSH4 is not available on ENCORE database.
14 RBPs can affect the levels of MSH4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MSH4 is not available on ENCORE database.

14 RBPs can affect the gene expression of MSH4 :

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Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MSH4	ENSG00000057468.6	39.26980	2.20780	4.15260	7.30860	5.53240	K562	CNOT7
MSH4	ENSG00000057468.6	37.82000	4.78630	2.98210	5.54100	4.43850	K562	CPSF6
MSH4	ENSG00000057468.6	34.94990	4.87420	2.84200	4.83010	3.69790	K562	FMR1
MSH4	ENSG00000057468.6	28.08980	4.50350	2.64080	3.52970	2.54450	K562	BOP1
MSH4	ENSG00000057468.6	13.74920	0.30770	5.48140	3.57340	2.36620	HepG2	CSTF2
MSH4	ENSG00000057468.6	24.77960	3.90510	2.66560	3.06710	2.07820	K562	KRR1
MSH4	ENSG00000057468.6	20.58730	3.43220	2.58450	2.62820	2.05250	K562	AQR
MSH4	ENSG00000057468.6	23.89770	5.22460	2.19340	2.74600	2.00230	K562	NSUN2
MSH4	ENSG00000057468.6	8.75180	0.00000	99999.99990	2.83840	1.98660	K562	RBM22
MSH4	ENSG00000057468.6	23.74650	5.50050	2.11000	2.64270	1.50470	K562	SRSF7
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MSH4

General Information

Functions

Localization

Domains (AlphaFold: MSH4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MSH4 is not avaliable on ENCORE database.

NO known proteins are bound to MSH4 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for MSH4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MSH4 is not available on ENCORE database.

14 RBPs can affect the gene expression of MSH4 :

The Knockdown/knockout RNA-Seq assay for MSH4 is not available on ENCORE database.

No RBPs affect the alternative splcing events of MSH4 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for MSH4 is not avaliable on ENCORE database.