MSH4

General Information

Gene Name       : MSH4
Gene ID             : ENSG00000057468.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MSH4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MSH4ENSG00000057468.60.030.030.03ENCSR000AEF
HepG2MSH4ENSG00000057468.60.000.000.00ENCSR985KAT
K562MSH4ENSG00000057468.60.010.000.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MSH4 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on MSH4 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for MSH4 is not avaliable on ENCORE database.






NO known proteins are bound to MSH4 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for MSH4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MSH4 is not available on ENCORE database.

  • 14 RBPs can affect the levels of MSH4.  








The Knockdown/knockout RNA-Seq assay for MSH4 is not available on ENCORE database.





14 RBPs can affect the gene expression of MSH4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MSH4ENSG00000057468.613.749200.307705.481403.573402.36620HepG2CSTF2
MSH4ENSG00000057468.620.587303.432202.584502.628202.05250K562AQR
MSH4ENSG00000057468.628.089804.503502.640803.529702.54450K562BOP1
MSH4ENSG00000057468.639.269802.207804.152607.308605.53240K562CNOT7
MSH4ENSG00000057468.637.820004.786302.982105.541004.43850K562CPSF6
MSH4ENSG00000057468.628.856108.239401.808202.276301.39130K562CELF1
MSH4ENSG00000057468.634.949904.874202.842004.830103.69790K562FMR1
MSH4ENSG00000057468.615.565602.288602.765701.963301.32070K562GRSF1
MSH4ENSG00000057468.619.140302.066103.211502.940801.31940K562HNRNPAB
MSH4ENSG00000057468.624.779603.905102.665603.067102.07820K562KRR1
MSH4ENSG00000057468.623.897705.224602.193402.746002.00230K562NSUN2
MSH4ENSG00000057468.68.751800.0000099999.999902.838401.98660K562RBM22
MSH4ENSG00000057468.623.746505.500502.110002.642701.50470K562SRSF7
MSH4ENSG00000057468.616.565303.865802.099202.062101.32860K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MSH4 is not available on ENCORE database.






No RBPs affect the alternative splcing events of MSH4 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for MSH4 is not avaliable on ENCORE database.