LRRC69

General Information

Gene Name : LRRC69
Gene ID : ENSG00000214954.8
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: LRRC69)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LRRC69	ENSG00000214954.8	0.83	1.00	0.92	ENCSR000AEF
HepG2	LRRC69	ENSG00000214954.8	0.43	0.96	0.69	ENCSR985KAT
K562	LRRC69	ENSG00000214954.8	3.65	3.88	3.76	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LRRC69 is not avaliable on ENCORE database.

Proteins bound to RNA

LRRC69 RNA is bound by 4 proteins.

eCLIP assay for LRRC69 is not avaliable on ENCORE database.

4 proteins are bound to LRRC69 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	92114919	92115070	+	CDS	4.09887	3.77023	K562	ZNF622
chr8	92169604	92169676	+	intron-Distal	4.48166	15.80902	HepG2	BCLAF1
chr8	92141992	92142050	+	intron-Distal	5.38553	8.88784	K562	PTBP1
chr8	92147027	92147124	+	intron-Distal	4.41454	5.04993	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for LRRC69 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for LRRC69 is not available on ENCORE database.
4 RBPs can affect the levels of LRRC69.

The Knockdown/knockout RNA-Seq assay for LRRC69 is not available on ENCORE database.

4 RBPs can affect the gene expression of LRRC69 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LRRC69	ENSG00000214954.4	29.35610	61.59000	-1.06900	2.31470	1.78770	K562	AGGF1
LRRC69	ENSG00000214954.4	14.90670	47.45400	-1.67060	2.45870	1.53930	K562	PABPN1
LRRC69	ENSG00000214954.4	55.66500	27.40800	1.02210	2.07760	1.38330	K562	POLR2G
LRRC69	ENSG00000214954.4	23.60030	63.55960	-1.42930	3.34570	2.75730	K562	PUS1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for LRRC69 is not available on ENCORE database.

1 RBPs can affect the splicing of LRRC69 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	LRRC69	ENSG00000214954.4	chr8	+	92218920	92219059			92212840	92213020	92231117	92231464	0.17100	0.00077	0.08813	included	K562	DROSHA

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LRRC69

General Information

Functions

Localization

Domains (AlphaFold: LRRC69)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LRRC69 is not avaliable on ENCORE database.

4 proteins are bound to LRRC69 RNA:

eCLIP assay for LRRC69 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LRRC69 is not available on ENCORE database.

4 RBPs can affect the gene expression of LRRC69 :

The Knockdown/knockout RNA-Seq assay for LRRC69 is not available on ENCORE database.

1 RBPs can affect the splicing of LRRC69 :

The Knockdown/knockout RNA-Seq assay for LRRC69 is not avaliable on ENCORE database.