HIST1H1B

General Information

Gene Name       : HIST1H1B
Gene ID             : ENSG00000184357.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HIST1H1B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HIST1H1BENSG00000184357.40.000.110.06ENCSR000AEF
HepG2HIST1H1BENSG00000184357.40.000.060.03ENCSR985KAT
K562HIST1H1BENSG00000184357.40.500.210.35ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HIST1H1B is not avaliable on ENCORE database.



Proteins bound to RNA
  • HIST1H1B RNA is bound by 13 proteins.  







eCLIP assay for HIST1H1B is not avaliable on ENCORE database.





13 proteins are bound to HIST1H1B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62783457127834660-3'-UTR,CDS9.57258400.00000K562SLBP
chr62783525027835348-5'-UTR,CDS3.771884.87311K562EIF3G
chr62783523627835333-5'-UTR,CDS5.3026713.12229K562GEMIN5
chr62783504327835064-CDS3.1956210.76271K562YBX3
chr62783472027834749-CDS3.751624.75336K562PUM1
chr62783497027834982-CDS3.018517.40075K562YBX3
chr62783478327834853-CDS3.5529913.94298K562UCHL5
chr62783524527835295-CDS5.2785414.47169K562RPS3
chr62783502827835043-CDS3.0740611.16611K562YBX3
chr62783475327834792-CDS4.587425.89812K562GRWD1
chr62783480327834862-CDS4.064917.43300K562BUD13
chr62783506427835070-CDS3.255668.26386K562YBX3
chr62783481827834887-CDS3.2608813.40547K562ZNF622
chr62783479927834846-CDS3.215075.91405HepG2BCLAF1
chr62783482727834892-CDS3.302917.39922K562PUM1
chr62783466627834743-CDS4.8259111.70407HepG2G3BP1
chr62783527327835296-CDS4.123513.86058K562GRWD1
chr62783480327834887-CDS4.2033512.34758K562ZNF800
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HIST1H1B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HIST1H1B is not available on ENCORE database.

  • 1 RBPs can affect the levels of HIST1H1B.  








The Knockdown/knockout RNA-Seq assay for HIST1H1B is not available on ENCORE database.





1 RBPs can affect the gene expression of HIST1H1B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HIST1H1BENSG00000184357.317.232703.528202.288102.442901.81240K562PTBP1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HIST1H1B is not available on ENCORE database.






No RBPs affect the alternative splcing events of HIST1H1B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HIST1H1B is not avaliable on ENCORE database.