FAM27C

General Information

Gene Name       : FAM27C
Gene ID             : ENSG00000154537.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM27C)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FAM27CENSG00000154537.43.988.676.33ENCSR000AEF
HepG2FAM27CENSG00000154537.41.811.101.46ENCSR985KAT
K562FAM27CENSG00000154537.444.3334.2039.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM27C is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM27C RNA is bound by 4 proteins.  







eCLIP assay for FAM27C is not avaliable on ENCORE database.





4 proteins are bound to FAM27C RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr94499072444990787+intron-Distal5.905907.89305K562PHF6
chr94499072244990755+intron-Distal3.887473.82735K562EWSR1
chr94499075544990772+intron-Distal3.887473.82735K562EWSR1
chr94499072344990791+intron-Distal3.279144.91491K562SLTM
chr94499072044990789+intron-Distal3.088349.76986K562EIF4G2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM27C is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM27C is not available on ENCORE database.

  • No RBPs affect the gene expression of FAM27C on ENCORE database.


The Knockdown/knockout RNA-Seq assay for FAM27C is not available on ENCORE database.






No RBPs affect the gene expression of FAM27C on ENCORE database.






The Knockdown/knockout RNA-Seq assay for FAM27C is not available on ENCORE database.






No RBPs affect the alternative splcing events of FAM27C on ENCORE database.





The Knockdown/knockout RNA-Seq assay for FAM27C is not avaliable on ENCORE database.