DSCAM

General Information

Gene Name       : DSCAM
Gene ID             : ENSG00000171587.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DSCAM)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DSCAMENSG00000171587.140.000.000.00ENCSR000AEF
HepG2DSCAMENSG00000171587.140.010.030.02ENCSR985KAT
K562DSCAMENSG00000171587.140.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DSCAM is not avaliable on ENCORE database.



Proteins bound to RNA
  • DSCAM RNA is bound by 2 proteins.  







eCLIP assay for DSCAM is not avaliable on ENCORE database.





2 proteins are bound to DSCAM RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr214200621642006239-intron-Distal6.275727.62751K562WRN
chr214200621642006230-intron-Distal6.9136225.84101K562DDX3X
chr214200623042006239-intron-Distal6.9136225.84101K562DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DSCAM is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DSCAM is not available on ENCORE database.

  • 1 RBPs can affect the levels of DSCAM.  








The Knockdown/knockout RNA-Seq assay for DSCAM is not available on ENCORE database.





1 RBPs can affect the gene expression of DSCAM :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DSCAMENSG00000171587.1016.499900.539604.934404.253003.64610HepG2RBM22
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DSCAM is not available on ENCORE database.






No RBPs affect the alternative splcing events of DSCAM on ENCORE database.





The Knockdown/knockout RNA-Seq assay for DSCAM is not avaliable on ENCORE database.