DCP1B

General Information

Gene Name : DCP1B
Gene ID : ENSG00000151065.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DCP1B)

Not Available

Antibody Validation

Bethyl Labs: A303-641A

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DCP1B	ENSG00000151065.13	12.88	12.21	12.55	ENCSR000AEF
HepG2	DCP1B	ENSG00000151065.13	10.35	11.53	10.94	ENCSR985KAT
K562	DCP1B	ENSG00000151065.13	3.46	4.25	3.85	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
DCP1B	ENCAB164GPF	A303-641A	1			Released, ENCODE4

KD RNA-Seq

GeneName	Cell_Line	Method	Sample_reps	Control_reps	KD%	Status	Project
DCP1B	K562	CRISPR	BGKcLV44-9,BGKcLV44-10	BGKcLV44-1,BGKcLV44-2	0.0,0.0	NotSatisfied	ENCORE2
DCP1B	K562	CRISPR	BGKcLV44-11,BGKcLV44-12	BGKcLV44-1,BGKcLV44-2	0.0,0.0	NotSatisfied	ENCORE2
DCP1B	K562	CRISPR	BGKcLV48-21,BGKcLV48-22	BGKcLV48-1,BGKcLV48-2	,no band on the position	Experimented	ENCORE2
DCP1B	HepG2	CRISPR	DCP1B-BGHcLV45-15,DCP1B-BGHcLV45-16	NT-BGHcLV45-1,NT-BGHcLV45-2	87.7,84.8	Submitting	ENCORE2
DCP1B	HepG2	CRISPR	BGHcLV45-17,BGHcLV45-18	BGHcLV45-1,BGHcLV45-2	75.5,55.9	NotSatisfied	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela
DCP1B	Product_ID: A303-641A Lot_ID: 1 Source: Bethyl Labs Target Name: DCP1B-human

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DCP1B is not avaliable on ENCORE database.

Proteins bound to RNA

DCP1B RNA is bound by 7 proteins.

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eCLIP assay for DCP1B is not avaliable on ENCORE database.

7 proteins are bound to DCP1B RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	2098485	2098584	-	intron-Distal	4.78678	9.54872	HepG2	PTBP1
chr12	2113463	2113557	-	5'-UTR,CDS,intron-Distal	4.36839	8.76364	HepG2	NCBP2
chr12	2113385	2113457	-	5'-UTR,CDS,intron-Distal	4.84878	6.69228	HepG2	PRPF8
chr12	2113557	2113620	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.11030	6.28722	HepG2	NCBP2
chr12	2058213	2058277	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.34878	6.23016	HepG2	PRPF8
chr12	2113244	2113324	-	intron-Distal	4.58595	5.59467	HepG2	PRPF4
chr12	2113404	2113449	-	5'-UTR,CDS,intron-Distal	4.92521	3.93614	HepG2	AQR
chr12	2094137	2094198	-	intron-Distal	3.30657	3.34920	HepG2	HLTF
chr12	2113526	2113599	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.98366	3.03048	HepG2	GTF2F1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 9 of 9 entries

eCLIP assay for DCP1B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DCP1B is not available on ENCORE database.
44 RBPs can affect the levels of DCP1B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DCP1B is not available on ENCORE database.

44 RBPs can affect the gene expression of DCP1B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DCP1B	ENSG00000151065.9	233.42890	535.63880	-1.19830	10.88290	9.89510	HepG2	AKAP1
DCP1B	ENSG00000151065.9	35.19970	131.40170	-1.90030	8.83010	7.90820	K562	PUS1
DCP1B	ENSG00000151065.9	276.43790	481.05400	-0.79920	7.36300	6.30760	HepG2	RBM25
DCP1B	ENSG00000151065.9	628.55430	367.73600	0.77330	6.53220	5.82410	HepG2	TIAL1
DCP1B	ENSG00000151065.9	52.36300	128.01390	-1.28970	5.82960	4.99570	K562	RBM15
DCP1B	ENSG00000151065.9	358.21000	531.85420	-0.57020	5.16700	4.57210	HepG2	SRSF1
DCP1B	ENSG00000151065.9	296.69580	486.46510	-0.71340	4.84070	4.01630	HepG2	NCBP2
DCP1B	ENSG00000151065.9	272.10030	443.86980	-0.70600	4.89260	3.98460	HepG2	HNRNPK
DCP1B	ENSG00000151065.9	61.65690	132.47700	-1.10340	4.76370	3.89950	K562	AKAP8L
DCP1B	ENSG00000151065.9	358.66180	530.05390	-0.56350	4.65050	3.87220	HepG2	QKI
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 46 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DCP1B is not available on ENCORE database.

1 RBPs can affect the splicing of DCP1B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	DCP1B	ENSG00000151065.9	chr12	-	2100286	2100412			2077009	2077076	2102429	2102557	0.33000	0.00013	0.00750	included	HepG2	HNRNPC

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DCP1B

General Information

Functions

Localization

Domains (AlphaFold: DCP1B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DCP1B is not avaliable on ENCORE database.

7 proteins are bound to DCP1B RNA:

eCLIP assay for DCP1B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DCP1B is not available on ENCORE database.

44 RBPs can affect the gene expression of DCP1B :

The Knockdown/knockout RNA-Seq assay for DCP1B is not available on ENCORE database.

1 RBPs can affect the splicing of DCP1B :

The Knockdown/knockout RNA-Seq assay for DCP1B is not avaliable on ENCORE database.