LRRD1

General Information

Gene Name : LRRD1
Gene ID : ENSG00000240720.8
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: LRRD1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LRRD1	ENSG00000240720.8	0.10	0.01	0.06	ENCSR000AEF
HepG2	LRRD1	ENSG00000240720.8	0.02	0.03	0.03	ENCSR985KAT
K562	LRRD1	ENSG00000240720.8	0.01	0.00	0.01	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LRRD1 is not avaliable on ENCORE database.

Proteins bound to RNA

LRRD1 RNA is bound by 28 proteins.

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eCLIP assay for LRRD1 is not avaliable on ENCORE database.

28 proteins are bound to LRRD1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	91763584	91763641	-	CDS,intron-Distal	4.48599	400.00000	HepG2	DDX3X
chr7	91763641	91763690	-	5'-UTR,CDS,intron-Distal	4.78443	400.00000	HepG2	DDX3X
chr7	91763690	91763776	-	5'-UTR,intron-Distal	4.77484	87.63447	HepG2	DDX3X
chr7	91763587	91763689	-	5'-UTR,CDS,intron-Distal	4.53677	63.25973	HepG2	RPS3
chr7	91763486	91763548	-	CDS,intron-Distal	3.72741	53.30016	HepG2	DDX3X
chr7	91763438	91763471	-	intron-Distal	4.78424	45.91725	K562	TIA1
chr7	91763487	91763569	-	CDS,intron-Distal	3.91904	43.57504	HepG2	RPS3
chr7	91763334	91763438	-	intron-Distal	3.10974	41.74856	K562	TIA1
chr7	91763265	91763354	-	intron-Distal	6.37678	32.60604	K562	HNRNPM
chr7	91742468	91742553	-	3'-UTR,intron-Distal	3.57893	28.02272	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 141 entries

eCLIP assay for LRRD1 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for LRRD1 is not available on ENCORE database.
1 RBPs can affect the levels of LRRD1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for LRRD1 is not available on ENCORE database.

1 RBPs can affect the gene expression of LRRD1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LRRD1	ENSG00000240720.3	9.05490	0.00000	99999.99990	2.31470	1.67500	HepG2	HNRNPC
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LRRD1

General Information

Functions

Localization

Domains (AlphaFold: LRRD1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LRRD1 is not avaliable on ENCORE database.

28 proteins are bound to LRRD1 RNA:

eCLIP assay for LRRD1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LRRD1 is not available on ENCORE database.

1 RBPs can affect the gene expression of LRRD1 :

The Knockdown/knockout RNA-Seq assay for LRRD1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of LRRD1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for LRRD1 is not avaliable on ENCORE database.