LIMS2

General Information

Gene Name : LIMS2
Gene ID : ENSG00000072163.19
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: LIMS2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LIMS2	ENSG00000072163.19	0.00	0.13	0.07	ENCSR000AEF
HepG2	LIMS2	ENSG00000072163.19	5.28	0.89	3.08	ENCSR985KAT
K562	LIMS2	ENSG00000072163.19	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LIMS2 is not avaliable on ENCORE database.

Proteins bound to RNA

LIMS2 RNA is bound by 1 proteins.

CanvasJS.com

eCLIP assay for LIMS2 is not avaliable on ENCORE database.

1 proteins are bound to LIMS2 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	128396647	128396792	-	3'-UTR,intron-Distal,intron-Proximal	4.63060	6.53456	HepG2	PCBP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 1 of 1 entries

eCLIP assay for LIMS2 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for LIMS2 is not available on ENCORE database.
56 RBPs can affect the levels of LIMS2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for LIMS2 is not available on ENCORE database.

56 RBPs can affect the gene expression of LIMS2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LIMS2	ENSG00000072163.14	241.86830	74.75670	1.69380	12.25830	10.99980	HepG2	GPKOW
LIMS2	ENSG00000072163.14	142.39620	27.05670	2.39580	13.10120	10.90780	HepG2	GNB2L1
LIMS2	ENSG00000072163.14	129.86530	35.01260	1.89100	11.65390	10.48070	HepG2	HNRNPU
LIMS2	ENSG00000072163.14	164.69660	48.56770	1.76160	10.87810	9.80080	HepG2	PUF60
LIMS2	ENSG00000072163.14	15.05560	71.83130	-2.25430	7.19320	6.28150	HepG2	BOP1
LIMS2	ENSG00000072163.14	176.53470	71.00660	1.31380	7.20810	5.78300	HepG2	HNRNPM
LIMS2	ENSG00000072163.14	43.47030	115.63600	-1.41150	5.94530	5.28780	HepG2	SRFBP1
LIMS2	ENSG00000072163.14	43.03720	117.62210	-1.45050	6.40370	5.23740	HepG2	FUBP3
LIMS2	ENSG00000072163.14	14.94420	75.97880	-2.34600	6.83140	5.20600	HepG2	SRSF3
LIMS2	ENSG00000072163.14	92.27650	34.32550	1.42660	5.91900	5.14960	HepG2	TRIM56
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 56 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LIMS2

General Information

Functions

Localization

Domains (AlphaFold: LIMS2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LIMS2 is not avaliable on ENCORE database.

1 proteins are bound to LIMS2 RNA:

eCLIP assay for LIMS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LIMS2 is not available on ENCORE database.

56 RBPs can affect the gene expression of LIMS2 :

The Knockdown/knockout RNA-Seq assay for LIMS2 is not available on ENCORE database.

No RBPs affect the alternative splcing events of LIMS2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for LIMS2 is not avaliable on ENCORE database.