HLA-F-AS1

General Information

Gene Name : HLA-F-AS1
Gene ID : ENSG00000214922.9
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: HLA-F-AS1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HLA-F-AS1	ENSG00000214922.9	2.25	0.99	1.62	ENCSR000AEF
HepG2	HLA-F-AS1	ENSG00000214922.9	1.84	1.99	1.92	ENCSR985KAT
K562	HLA-F-AS1	ENSG00000214922.9	2.50	2.29	2.40	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HLA-F-AS1 is not avaliable on ENCORE database.

Proteins bound to RNA

HLA-F-AS1 RNA is bound by 4 proteins.

CanvasJS.com

eCLIP assay for HLA-F-AS1 is not avaliable on ENCORE database.

4 proteins are bound to HLA-F-AS1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	29715649	29715733	-	intron-Distal	5.43891	11.19214	K562	HNRNPK
chr6	29715431	29715579	-	intron-Distal	3.66483	7.12565	K562	HNRNPK
chr6	29716573	29716622	-	intron-Distal	5.39217	5.99517	HepG2	EFTUD2
chr6	29716631	29716700	-	intron-Distal	4.50974	5.64484	HepG2	PRPF8
chr6	29715772	29715880	-	intron-Distal	3.58526	3.86715	K562	HNRNPK
chr6	29714725	29714782	-	intron-Distal	3.96767	3.60944	K562	TARDBP
chr6	29713940	29714040	-	intron-Distal	4.24658	3.58835	K562	HNRNPK
chr6	29713599	29713706	-	intron-Distal,intron-Proximal	3.60468	3.41981	K562	HNRNPK
chr6	29716520	29716559	-	intron-Distal	4.71188	3.13405	HepG2	EFTUD2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 9 of 9 entries

eCLIP assay for HLA-F-AS1 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for HLA-F-AS1 is not available on ENCORE database.
30 RBPs can affect the levels of HLA-F-AS1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for HLA-F-AS1 is not available on ENCORE database.

30 RBPs can affect the gene expression of HLA-F-AS1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HLA-F-AS1	ENSG00000214922.5	334.27770	66.48200	2.32990	36.21980	34.85400	HepG2	SSB
HLA-F-AS1	ENSG00000214922.5	237.92350	67.69950	1.81320	17.07750	15.71430	HepG2	DKC1
HLA-F-AS1	ENSG00000214922.5	123.22630	37.42530	1.71910	7.79960	6.79750	HepG2	HNRNPA1
HLA-F-AS1	ENSG00000214922.5	170.26540	73.93620	1.20330	5.98860	5.03240	HepG2	IGF2BP2
HLA-F-AS1	ENSG00000214922.5	158.16750	77.71800	1.02500	4.30490	3.51070	HepG2	EIF4A3
HLA-F-AS1	ENSG00000214922.5	36.43560	81.57710	-1.16280	3.90850	3.13230	K562	PTBP1
HLA-F-AS1	ENSG00000214922.5	98.24960	41.63250	1.23860	3.86630	3.05780	HepG2	HNRNPC
HLA-F-AS1	ENSG00000214922.5	84.51550	35.80520	1.23890	3.56820	2.90130	K562	HNRNPC
HLA-F-AS1	ENSG00000214922.5	127.51420	73.89130	0.78710	3.68950	2.85390	HepG2	DAZAP1
HLA-F-AS1	ENSG00000214922.5	153.93050	89.35890	0.78450	3.41210	2.43790	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 33 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HLA-F-AS1

General Information

Functions

Localization

Domains (AlphaFold: HLA-F-AS1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HLA-F-AS1 is not avaliable on ENCORE database.

4 proteins are bound to HLA-F-AS1 RNA:

eCLIP assay for HLA-F-AS1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HLA-F-AS1 is not available on ENCORE database.

30 RBPs can affect the gene expression of HLA-F-AS1 :

The Knockdown/knockout RNA-Seq assay for HLA-F-AS1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of HLA-F-AS1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for HLA-F-AS1 is not avaliable on ENCORE database.