CCDC109B

General Information

Gene Name : CCDC109B
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CCDC109B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary

RNA Targets

eCLIP assay for CCDC109B is not avaliable on ENCORE database.

Proteins bound to RNA

NO known proteins bind on CCDC109B RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for CCDC109B is not avaliable on ENCORE database.

NO known proteins are bound to CCDC109B RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for CCDC109B is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for CCDC109B is not available on ENCORE database.
22 RBPs can affect the levels of CCDC109B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CCDC109B is not available on ENCORE database.

22 RBPs can affect the gene expression of CCDC109B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CCDC109B	ENSG00000005059.11	57.37080	9.34620	2.61780	6.02700	5.01340	HepG2	RAVER1
CCDC109B	ENSG00000005059.11	4.32980	29.66630	-2.77650	4.49150	3.86990	HepG2	SSB
CCDC109B	ENSG00000005059.11	62.99430	136.05170	-1.11090	4.66950	3.39140	K562	PCBP2
CCDC109B	ENSG00000005059.11	53.22600	13.29380	2.00130	4.00650	3.38360	HepG2	AKAP1
CCDC109B	ENSG00000005059.11	31.96300	83.47120	-1.38490	4.16370	3.08660	K562	BOP1
CCDC109B	ENSG00000005059.11	37.31800	84.74110	-1.18320	3.52290	2.63100	K562	GPKOW
CCDC109B	ENSG00000005059.11	215.25420	132.85080	0.69610	3.08650	2.24820	K562	HSPD1
CCDC109B	ENSG00000005059.11	58.67210	107.85930	-0.87840	3.06360	1.86160	K562	GLRX3
CCDC109B	ENSG00000005059.11	37.30320	76.53880	-1.03690	2.75320	1.84090	K562	FTO
CCDC109B	ENSG00000005059.11	75.42480	136.31050	-0.85380	3.13110	1.81950	K562	ABCF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 22 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CCDC109B

General Information

Functions

Localization

Domains (AlphaFold: CCDC109B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CCDC109B is not avaliable on ENCORE database.

NO known proteins are bound to CCDC109B RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for CCDC109B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CCDC109B is not available on ENCORE database.

22 RBPs can affect the gene expression of CCDC109B :

The Knockdown/knockout RNA-Seq assay for CCDC109B is not available on ENCORE database.

No RBPs affect the alternative splcing events of CCDC109B on ENCORE database.

The Knockdown/knockout RNA-Seq assay for CCDC109B is not avaliable on ENCORE database.