SDHAP2

General Information

Gene Name       : SDHAP2
Gene ID             : ENSG00000215837.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SDHAP2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SDHAP2ENSG00000215837.70.000.030.01ENCSR000AEF
HepG2SDHAP2ENSG00000215837.74.310.522.42ENCSR985KAT
K562SDHAP2ENSG00000215837.70.591.040.81ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SDHAP2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SDHAP2 RNA is bound by 11 proteins.  







eCLIP assay for SDHAP2 is not avaliable on ENCORE database.





11 proteins are bound to SDHAP2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3195411237195411382+intron-Distal3.085733.04614K562FUS
chr3195410965195411024+intron-Distal3.586817.21479K562UCHL5
chr3195410961195411023+intron-Distal3.226115.24703K562BUD13
chr3195395510195395556+intron-Proximal3.874884.98250K562AQR
chr3195410630195410743+intron-Proximal3.5350414.20174K562ZNF622
chr3195393032195393086+intron-Proximal4.6702910.13662HepG2BCLAF1
chr3195410661195410745+intron-Proximal3.537208.81232HepG2SRSF1
chr3195391078195391133+intron-Proximal4.663253.25266K562DDX24
chr3195392986195393086+intron-Proximal4.589476.36164K562DDX24
chr3195395368195395429+intron-Proximal3.126047.56548K562BUD13
chr3195391120195391155+intron-Proximal6.6626316.44435K562AQR
chr3195410533195410643+intron-Proximal3.856813.66668K562KHSRP
chr3195410634195410751+intron-Proximal3.171036.77715K562SRSF1
chr3195410722195410757+intron-Proximal4.2695015.35207K562RBM15
chr3195410592195410640+intron-Proximal3.210814.38107K562AQR
chr3195395388195395413+intron-Proximal4.276507.82199HepG2BCLAF1
chr3195390892195390948+intron-Proximal4.2224314.51197K562SF3B4
chr3195410621195410734+intron-Proximal3.5114112.81333K562DDX24
chr3195391107195391152+intron-Proximal4.496164.23351K562BUD13
chr3195391155195391163+intron-Proximal6.5157615.90046K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SDHAP2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SDHAP2 is not available on ENCORE database.

  • 62 RBPs can affect the levels of SDHAP2.  








The Knockdown/knockout RNA-Seq assay for SDHAP2 is not available on ENCORE database.





62 RBPs can affect the gene expression of SDHAP2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SDHAP2ENSG00000215837.711.5470038.24780-1.727903.300902.16990HepG2AKAP8
SDHAP2ENSG00000215837.721.305200.0000099999.999904.711903.48920HepG2BCCIP
SDHAP2ENSG00000215837.718.135300.0000099999.999904.549103.42190HepG2BCLAF1
SDHAP2ENSG00000215837.70.0000020.59190-99999.999993.502002.63840HepG2CIRBP
SDHAP2ENSG00000215837.70.0000097.75730-99999.9999926.4726024.20130HepG2CNOT7
SDHAP2ENSG00000215837.70.0000016.38770-99999.999993.126102.40040HepG2CPSF6
SDHAP2ENSG00000215837.712.561500.0000099999.999902.732601.96320HepG2DDX55
SDHAP2ENSG00000215837.70.000007.00040-99999.999992.040401.42660HepG2DNAJC21
SDHAP2ENSG00000215837.70.000006.93560-99999.999992.142401.55510HepG2DNAJC2
SDHAP2ENSG00000215837.762.9036022.875801.459203.542902.82190HepG2EIF4A3
SDHAP2ENSG00000215837.70.0000015.95790-99999.999995.140604.00520HepG2EWSR1
SDHAP2ENSG00000215837.70.5269018.58410-5.140302.901202.24690HepG2GPKOW
SDHAP2ENSG00000215837.70.0000021.75450-99999.999993.578402.79030HepG2HNRNPK
SDHAP2ENSG00000215837.70.0000017.73450-99999.999993.341902.65700HepG2HNRNPLL
SDHAP2ENSG00000215837.70.000007.80830-99999.999992.494501.91830HepG2HNRNPU
SDHAP2ENSG00000215837.70.0000056.22950-99999.9999912.006408.25490HepG2HNRNPUL1
SDHAP2ENSG00000215837.71.2345018.07080-3.871702.469701.55810HepG2MTPAP
SDHAP2ENSG00000215837.745.2175010.836702.060902.222601.53850HepG2NOL12
SDHAP2ENSG00000215837.70.0000064.89650-99999.9999914.109309.74880HepG2NPM1
SDHAP2ENSG00000215837.70.0000015.71960-99999.999992.996102.21840HepG2NSUN2
SDHAP2ENSG00000215837.73.6827019.52550-2.406502.955401.31670HepG2PA2G4
SDHAP2ENSG00000215837.730.0768089.38240-1.571305.009903.78510HepG2PABPC1
SDHAP2ENSG00000215837.731.4321087.68930-1.480204.989502.98550HepG2PNPT1
SDHAP2ENSG00000215837.74.9394039.66240-3.005403.323901.38630HepG2PSIP1
SDHAP2ENSG00000215837.754.2701010.333402.392703.817103.12980HepG2PUF60
SDHAP2ENSG00000215837.73.2760058.11260-4.148807.784303.90400HepG2RBFOX2
SDHAP2ENSG00000215837.70.0000061.64590-99999.9999913.8433010.08480HepG2RBM17
SDHAP2ENSG00000215837.70.0000016.17100-99999.999994.697203.83900HepG2RBM25
SDHAP2ENSG00000215837.70.0000054.10570-99999.9999912.001908.61810HepG2RBM39
SDHAP2ENSG00000215837.745.7272094.45030-1.046503.115401.48600HepG2RBM47
SDHAP2ENSG00000215837.72.3814025.35440-3.412403.185302.46040HepG2RPLP0
SDHAP2ENSG00000215837.74.1907038.72350-3.207903.522402.62110HepG2RPS2
SDHAP2ENSG00000215837.714.8522098.26200-2.726005.600404.45800HepG2RPS3A
SDHAP2ENSG00000215837.734.219106.954302.298704.346203.57060HepG2SAFB2
SDHAP2ENSG00000215837.74.9421025.50180-2.367402.773801.83320HepG2SERBP1
SDHAP2ENSG00000215837.716.9678059.55200-1.811303.095701.64170HepG2SF1
SDHAP2ENSG00000215837.720.567600.0000099999.999906.135005.10830HepG2SF3A3
SDHAP2ENSG00000215837.70.0000017.55790-99999.999993.304402.53960HepG2SF3B1
SDHAP2ENSG00000215837.78.8819057.80500-2.702304.774502.79270HepG2SFPQ
SDHAP2ENSG00000215837.70.0000053.23690-99999.9999912.840509.76490HepG2SNRNP200
SDHAP2ENSG00000215837.70.0000019.53470-99999.999993.598802.70360HepG2SNRNP70
SDHAP2ENSG00000215837.715.359800.0000099999.999903.375001.58210HepG2SRP68
SDHAP2ENSG00000215837.750.6573010.187002.313902.090601.53710HepG2SRSF5
SDHAP2ENSG00000215837.70.0000016.08060-99999.999994.764904.06220HepG2TAF15
SDHAP2ENSG00000215837.73.2617040.75360-3.643307.191705.56160HepG2TBRG4
SDHAP2ENSG00000215837.723.277907.654901.604402.021501.52510HepG2TRIM56
SDHAP2ENSG00000215837.776.5063010.073802.924909.277907.49880HepG2TUFM
SDHAP2ENSG00000215837.70.0000061.90690-99999.9999913.5336011.27420HepG2U2AF2
SDHAP2ENSG00000215837.723.117000.0000099999.999905.259403.85200HepG2UPF2
SDHAP2ENSG00000215837.78.450600.0000099999.999902.573801.55640HepG2UTP18
SDHAP2ENSG00000215837.727.8067088.01900-1.662402.670001.59590HepG2XPO5
SDHAP2ENSG00000215837.70.000009.66000-99999.999992.395801.42210K562CSTF2
SDHAP2ENSG00000215837.710.594200.0000099999.999903.427401.93010K562DDX6
SDHAP2ENSG00000215837.714.324900.0000099999.999904.503602.93820K562EIF2S1
SDHAP2ENSG00000215837.79.904900.0000099999.999903.435602.12460K562EIF4B
SDHAP2ENSG00000215837.77.699300.0000099999.999902.431701.63700K562FIP1L1
SDHAP2ENSG00000215837.76.544300.0000099999.999901.834301.32150K562FXR1
SDHAP2ENSG00000215837.715.465100.0000099999.999904.279803.55380K562HNRNPC
SDHAP2ENSG00000215837.78.811700.0000099999.999902.551001.37140K562NCBP2
SDHAP2ENSG00000215837.710.076200.0000099999.999902.519801.80390K562PRPF8
SDHAP2ENSG00000215837.718.496600.0000099999.999905.273902.94290K562SRP68
SDHAP2ENSG00000215837.712.172600.0000099999.999902.493701.53100K562UCHL5
SDHAP2ENSG00000215837.714.787700.0000099999.999903.651902.19260K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SDHAP2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SDHAP2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SDHAP2 is not avaliable on ENCORE database.