| RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
|---|
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
|---|---|---|---|---|---|---|---|---|
| chr2 | 120728004 | 120728077 | + | intron-Distal | 6.44669 | 21.47104 | HepG2 | QKI |
| chr2 | 120689741 | 120689816 | + | intron-Distal | 4.37578 | 15.38529 | HepG2 | PTBP1 |
| chr2 | 120718380 | 120718524 | + | 3'-UTR,CDS,intron-Proximal | 5.17384 | 13.80283 | HepG2 | BCLAF1 |
| chr2 | 120646634 | 120646740 | + | intron-Distal | 3.90416 | 12.21417 | HepG2 | MATR3 |
| chr2 | 120523449 | 120523547 | + | intron-Distal | 6.10169 | 11.47680 | K562 | EIF4G2 |
| chr2 | 120552605 | 120552733 | + | intron-Distal | 5.42237 | 10.04692 | HepG2 | HNRNPM |
| chr2 | 120725410 | 120725489 | + | 3'-UTR,CDS,intron-Proximal | 4.11184 | 9.80976 | HepG2 | BCLAF1 |
| chr2 | 120634895 | 120634940 | + | CDS,intron-Proximal | 3.91812 | 8.08603 | HepG2 | BCLAF1 |
| chr2 | 120620186 | 120620220 | + | CDS,intron-Proximal | 4.41655 | 7.97334 | HepG2 | BCLAF1 |
| chr2 | 120723071 | 120723145 | + | 3'-UTR,CDS,intron-Proximal | 5.25407 | 7.95223 | HepG2 | BCLAF1 |
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|
| PTPN4 | ENSG00000088179.4 | 443.78230 | 810.65050 | -0.86920 | 14.59840 | 13.40080 | K562 | AGGF1 | |
| PTPN4 | ENSG00000088179.4 | 1186.37230 | 679.88020 | 0.80310 | 13.28160 | 12.06070 | HepG2 | QKI | |
| PTPN4 | ENSG00000088179.4 | 1052.72010 | 613.08150 | 0.77990 | 12.83430 | 11.76030 | HepG2 | TAF15 | |
| PTPN4 | ENSG00000088179.4 | 1524.82090 | 1025.50440 | 0.57220 | 11.21070 | 10.13250 | HepG2 | ETF1 | |
| PTPN4 | ENSG00000088179.4 | 1419.10280 | 683.49910 | 1.05390 | 11.12920 | 9.79410 | HepG2 | EIF4B | |
| PTPN4 | ENSG00000088179.4 | 994.96490 | 617.00670 | 0.68930 | 8.34730 | 7.22530 | HepG2 | RBM25 | |
| PTPN4 | ENSG00000088179.4 | 479.34010 | 836.65210 | -0.80360 | 8.06880 | 7.18850 | K562 | PUS1 | |
| PTPN4 | ENSG00000088179.4 | 494.83650 | 843.50030 | -0.76940 | 7.84930 | 6.69550 | K562 | AKAP8L | |
| PTPN4 | ENSG00000088179.4 | 1094.99640 | 566.53510 | 0.95060 | 7.90070 | 6.57640 | HepG2 | SNRNP70 | |
| PTPN4 | ENSG00000088179.4 | 336.40570 | 536.48360 | -0.67330 | 6.51430 | 5.52860 | K562 | PTBP1 | |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
| Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE | PTPN4 | ENSG00000088179.4 | chr2 | + | 120703916 | 120704000 | 120702656 | 120702816 | 120704093 | 120704150 | -0.22000 | 0.00023 | 0.00356 | excluded | K562 | AQR | |||
| SE | PTPN4 | ENSG00000088179.4 | chr2 | + | 120674187 | 120674266 | 120672754 | 120672818 | 120677644 | 120677817 | -0.33000 | 0.00047 | 0.09435 | excluded | K562 | WDR43 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".