CLIP3

General Information

Gene Name : CLIP3
Gene ID : ENSG00000105270.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CLIP3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CLIP3	ENSG00000105270.14	0.54	0.32	0.43	ENCSR000AEF
HepG2	CLIP3	ENSG00000105270.14	0.12	0.20	0.16	ENCSR985KAT
K562	CLIP3	ENSG00000105270.14	0.08	0.11	0.10	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary

RNA Targets

eCLIP assay for CLIP3 is not avaliable on ENCORE database.

Proteins bound to RNA

NO known proteins bind on CLIP3 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for CLIP3 is not avaliable on ENCORE database.

NO known proteins are bound to CLIP3 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for CLIP3 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for CLIP3 is not available on ENCORE database.
76 RBPs can affect the levels of CLIP3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CLIP3 is not available on ENCORE database.

76 RBPs can affect the gene expression of CLIP3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CLIP3	ENSG00000105270.10	253.08040	18.82010	3.74910	23.40040	20.94450	K562	PUF60
CLIP3	ENSG00000105270.10	81.57540	10.16050	3.00510	10.82960	9.78030	K562	AQR
CLIP3	ENSG00000105270.10	169.89200	55.24000	1.62070	10.25530	9.21740	HepG2	ETF1
CLIP3	ENSG00000105270.10	213.78780	51.17100	2.06270	10.61740	8.71750	K562	FTO
CLIP3	ENSG00000105270.10	80.71560	15.11260	2.41700	8.38900	7.40050	K562	HNRNPC
CLIP3	ENSG00000105270.10	126.27670	30.04270	2.07140	9.26980	7.00340	K562	PABPC1
CLIP3	ENSG00000105270.10	118.56090	33.08140	1.84140	9.05050	6.99850	K562	UTP3
CLIP3	ENSG00000105270.10	198.10830	77.78170	1.34870	7.71190	6.50630	HepG2	NSUN2
CLIP3	ENSG00000105270.10	250.44720	60.35820	2.05280	7.78440	6.30590	K562	FMR1
CLIP3	ENSG00000105270.10	65.69760	16.32410	2.00870	6.80920	5.53600	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 93 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CLIP3

General Information

Functions

Localization

Domains (AlphaFold: CLIP3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CLIP3 is not avaliable on ENCORE database.

NO known proteins are bound to CLIP3 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for CLIP3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CLIP3 is not available on ENCORE database.

76 RBPs can affect the gene expression of CLIP3 :

The Knockdown/knockout RNA-Seq assay for CLIP3 is not available on ENCORE database.

No RBPs affect the alternative splcing events of CLIP3 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for CLIP3 is not avaliable on ENCORE database.