Experiment Information (Status: Released)

RBP	ZRANB2
gene_aliases
Status	Released
Status_date	2020-11-23
Project	ENCODE4
Note
ID	20

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
ZRANB2-1300	RBNS	20-20	1300	ZRANB2_1300.fastq.gz
ZRANB2-320	RBNS	20-20	320	ZRANB2_320.fastq.gz
ZRANB2-80	RBNS	20-20	80	ZRANB2_80.fastq.gz
ZRANB2-input	CN	20-20	0	ZRANB2_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:ZRANB2	ENCSR927QJQ	experiment	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			1913
chris-burge:lib-ZRANB2-1	ENCLB773LIF	library	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			1951
chris-burge:lib-ZRANB2-2	ENCLB078XKL	library	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			1952
chris-burge:lib-ZRANB2-3	ENCLB724ZTG	library	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			1953
chris-burge:ZRANB2_1300.fastq.gz	ENCFF488DBR	file_fastq	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			1985
chris-burge:ZRANB2_320.fastq.gz	ENCFF090FQJ	file_fastq	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			1986
chris-burge:ZRANB2_80.fastq.gz	ENCFF158XJZ	file_fastq	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			1987
chris-burge:ZRANB2_input.fastq.gz	ENCFF056CJU	file_fastq	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			1988
chris-burge:ZRANB2_5mer_logo0.PWM	ENCFF266UEH	file_pwm	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			2034
chris-burge:ZRANB2_5mer_logo1.PWM	ENCFF300YSL	file_pwm	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			2035
chris-burge:ZRANB2_6mer_logo0.PWM	ENCFF611VZL	file_pwm	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			2036
chris-burge:ZRANB2_enrichment_R.4mers.mark_adapters.txt	ENCFF985YKH	file_enrichment	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			2071
chris-burge:ZRANB2_enrichment_R.5mers.mark_adapters.txt	ENCFF810PMV	file_enrichment	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			2072
chris-burge:ZRANB2_enrichment_R.6mers.mark_adapters.txt	ENCFF346EHH	file_enrichment	RNA Bind-n-Seq	ZRANB2		Yes	Released	2020-11-23	ENCODE4			2073

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
ZRANB2_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SAFB2_input.fastq.gz	ENCODE4
ZRANB2_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SAFB2_input.fastq.gz	ENCODE4
ZRANB2_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SAFB2_input.fastq.gz	ENCODE4
ZRANB2_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE4
ZRANB2_5mer_logo0.PWM	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZRANB2_1300.fastq.gz,ZRANB2_320.fastq.gz,ZRANB2_80.fastq.gz,SAFB2_input.fastq.gz		ENCODE4
ZRANB2_5mer_logo1.PWM	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZRANB2_1300.fastq.gz,ZRANB2_320.fastq.gz,ZRANB2_80.fastq.gz,SAFB2_input.fastq.gz		ENCODE4
ZRANB2_6mer_logo0.PWM	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZRANB2_1300.fastq.gz,ZRANB2_320.fastq.gz,ZRANB2_80.fastq.gz,SAFB2_input.fastq.gz		ENCODE4
ZRANB2_enrichment_R.4mers.mark_adapters.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZRANB2_1300.fastq.gz,ZRANB2_320.fastq.gz,ZRANB2_80.fastq.gz,SAFB2_input.fastq.gz		ENCODE4
ZRANB2_enrichment_R.5mers.mark_adapters.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZRANB2_1300.fastq.gz,ZRANB2_320.fastq.gz,ZRANB2_80.fastq.gz,SAFB2_input.fastq.gz		ENCODE4
ZRANB2_enrichment_R.6mers.mark_adapters.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZRANB2_1300.fastq.gz,ZRANB2_320.fastq.gz,ZRANB2_80.fastq.gz,SAFB2_input.fastq.gz		ENCODE4
ZRANB2_5mer_seqlogos.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4
ZRANB2_6mer_seqlogos.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE4
ZRANB2_coomassie.pdf	pdf	document	RNA Bind-n-Seq	Burge Lab			ENCODE4