ENCORE RBNS:ZCRB1

ZCRB1 RNA Bind-n-Seq

Experiment Information (Status: Released)


RBP	ZCRB1
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	46

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
ZCRB1-1300	RBNS	20-20	1300	ZCRB1_1300.fastq.gz
ZCRB1-20	RBNS	20-20	20	ZCRB1_20.fastq.gz
ZCRB1-320	RBNS	20-20	320	ZCRB1_320.fastq.gz
ZCRB1-5	RBNS	20-20	5	ZCRB1_5.fastq.gz
ZCRB1-80	RBNS	20-20	80	ZCRB1_80.fastq.gz
ZCRB1-input	CN	20-20	0	ZCRB1_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:ZCRB1	ENCSR205HMN	experiment	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-12	ENCODE3			8143
chris-burge:lib-ZCRB1-1	ENCLB081TLN	library	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-12	ENCODE3			8612
chris-burge:lib-ZCRB1-2	ENCLB118KDT	library	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-12	ENCODE3			8613
chris-burge:lib-ZCRB1-3	ENCLB959CZC	library	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-12	ENCODE3			8614
chris-burge:lib-ZCRB1-4	ENCLB113NQG	library	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-12	ENCODE3			8615
chris-burge:lib-ZCRB1-5	ENCLB294UWC	library	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-12	ENCODE3			8616
chris-burge:ZCRB1_1300.fastq.gz	ENCFF678GKT	file_fastq	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-14	ENCODE3			8999
chris-burge:ZCRB1_20.fastq.gz	ENCFF526DSN	file_fastq	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-14	ENCODE3			9000
chris-burge:ZCRB1_320.fastq.gz	ENCFF862JMB	file_fastq	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-14	ENCODE3			9001
chris-burge:ZCRB1_5.fastq.gz	ENCFF758ORV	file_fastq	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-14	ENCODE3			9002
chris-burge:ZCRB1_80.fastq.gz	ENCFF449IAQ	file_fastq	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-14	ENCODE3			9003
chris-burge:ZCRB1_enrichment_R.4mers.txt	ENCFF577HCJ	file_enrichment	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-14	ENCODE3			9547
chris-burge:ZCRB1_enrichment_R.5mers.txt	ENCFF113HZK	file_enrichment	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-14	ENCODE3			9548
chris-burge:ZCRB1_enrichment_R.6mers.txt	ENCFF121DTB	file_enrichment	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-14	ENCODE3			9549
chris-burge:ZCRB1_enrichment_R.7mers.txt	ENCFF241MOO	file_enrichment	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-14	ENCODE3			9550
chris-burge:ZCRB1_est_binding_frac.4mers.txt	ENCFF381OHL	file_library-fraction	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-14	ENCODE3			9551
chris-burge:ZCRB1_est_binding_frac.5mers.txt	ENCFF231GAA	file_library-fraction	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-14	ENCODE3			9552
chris-burge:ZCRB1_est_binding_frac.6mers.txt	ENCFF920HNU	file_library-fraction	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-14	ENCODE3			9553
chris-burge:ZCRB1_est_binding_frac.7mers.txt	ENCFF512GKK	file_library-fraction	RNA Bind-n-Seq	ZCRB1		Yes	Released	2022-07-14	ENCODE3			9554

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
ZCRB1.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
ZCRB1_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CNOT4_input.fastq.gz	ENCODE3
ZCRB1_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CNOT4_input.fastq.gz	ENCODE3
ZCRB1_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CNOT4_input.fastq.gz	ENCODE3
ZCRB1_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CNOT4_input.fastq.gz	ENCODE3
ZCRB1_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CNOT4_input.fastq.gz	ENCODE3
ZCRB1_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
ZCRB1_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZCRB1_1300.fastq.gz,ZCRB1_20.fastq.gz,ZCRB1_320.fastq.gz,ZCRB1_5.fastq.gz,ZCRB1_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
ZCRB1_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZCRB1_1300.fastq.gz,ZCRB1_20.fastq.gz,ZCRB1_320.fastq.gz,ZCRB1_5.fastq.gz,ZCRB1_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
ZCRB1_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZCRB1_1300.fastq.gz,ZCRB1_20.fastq.gz,ZCRB1_320.fastq.gz,ZCRB1_5.fastq.gz,ZCRB1_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
ZCRB1_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZCRB1_1300.fastq.gz,ZCRB1_20.fastq.gz,ZCRB1_320.fastq.gz,ZCRB1_5.fastq.gz,ZCRB1_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
ZCRB1_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZCRB1_1300.fastq.gz,ZCRB1_20.fastq.gz,ZCRB1_320.fastq.gz,ZCRB1_5.fastq.gz,ZCRB1_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
ZCRB1_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZCRB1_1300.fastq.gz,ZCRB1_20.fastq.gz,ZCRB1_320.fastq.gz,ZCRB1_5.fastq.gz,ZCRB1_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
ZCRB1_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZCRB1_1300.fastq.gz,ZCRB1_20.fastq.gz,ZCRB1_320.fastq.gz,ZCRB1_5.fastq.gz,ZCRB1_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3
ZCRB1_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ZCRB1_1300.fastq.gz,ZCRB1_20.fastq.gz,ZCRB1_320.fastq.gz,ZCRB1_5.fastq.gz,ZCRB1_80.fastq.gz,CNOT4_input.fastq.gz		ENCODE3