ENCORE RBNS:RBM4B

RBM4B RNA Bind-n-Seq

Experiment Information (Status: Released)


RBP	RBM4B
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	50

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
RBM4B-1300	RBNS	20-20	1300	RBM4B_1300.fastq.gz
RBM4B-320	RBNS	20-20	320	RBM4B_320.fastq.gz
RBM4B-5	RBNS	20-20	5	RBM4B_5.fastq.gz
RBM4B-80	RBNS	20-20	80	RBM4B_80.fastq.gz
RBM4B-input	CN	20-20	0	RBM4B_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:RBM4B	ENCSR905BJK	experiment	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-12	ENCODE3			8101
chris-burge:lib-RBM4B-1	ENCLB815RZX	library	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-12	ENCODE3			8488
chris-burge:lib-RBM4B-3	ENCLB881LAT	library	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-12	ENCODE3			8489
chris-burge:lib-RBM4B-4	ENCLB756XVZ	library	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-12	ENCODE3			8490
chris-burge:lib-RBM4B-5	ENCLB567YNW	library	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-12	ENCODE3			8491
chris-burge:RBM4B_1300.fastq.gz	ENCFF030UYE	file_fastq	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-14	ENCODE3			8889
chris-burge:RBM4B_320.fastq.gz	ENCFF414MZG	file_fastq	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-14	ENCODE3			8890
chris-burge:RBM4B_5.fastq.gz	ENCFF642LIU	file_fastq	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-14	ENCODE3			8891
chris-burge:RBM4B_80.fastq.gz	ENCFF933GYK	file_fastq	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-14	ENCODE3			8892
chris-burge:RBM4B_enrichment_R.4mers.txt	ENCFF170CFD	file_enrichment	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-14	ENCODE3			9389
chris-burge:RBM4B_enrichment_R.5mers.txt	ENCFF324AVV	file_enrichment	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-14	ENCODE3			9390
chris-burge:RBM4B_enrichment_R.6mers.txt	ENCFF723LYO	file_enrichment	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-14	ENCODE3			9391
chris-burge:RBM4B_enrichment_R.7mers.txt	ENCFF604EQA	file_enrichment	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-14	ENCODE3			9392
chris-burge:RBM4B_est_binding_frac.4mers.txt	ENCFF852LOZ	file_library-fraction	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-14	ENCODE3			9393
chris-burge:RBM4B_est_binding_frac.5mers.txt	ENCFF009TPD	file_library-fraction	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-14	ENCODE3			9394
chris-burge:RBM4B_est_binding_frac.6mers.txt	ENCFF999HWQ	file_library-fraction	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-14	ENCODE3			9395
chris-burge:RBM4B_est_binding_frac.7mers.txt	ENCFF471UTH	file_library-fraction	RNA Bind-n-Seq	RBM4B		Yes	Released	2022-07-14	ENCODE3			9396

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
RBM4B.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
RBM4B_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBMS3_input.fastq.gz	ENCODE3
RBM4B_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBMS3_input.fastq.gz	ENCODE3
RBM4B_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBMS3_input.fastq.gz	ENCODE3
RBM4B_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		RBMS3_input.fastq.gz	ENCODE3
RBM4B_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
RBM4B_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM4B_1300.fastq.gz,RBM4B_320.fastq.gz,RBM4B_5.fastq.gz,RBM4B_80.fastq.gz,RBMS3_input.fastq.gz		ENCODE3
RBM4B_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM4B_1300.fastq.gz,RBM4B_320.fastq.gz,RBM4B_5.fastq.gz,RBM4B_80.fastq.gz,RBMS3_input.fastq.gz		ENCODE3
RBM4B_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM4B_1300.fastq.gz,RBM4B_320.fastq.gz,RBM4B_5.fastq.gz,RBM4B_80.fastq.gz,RBMS3_input.fastq.gz		ENCODE3
RBM4B_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM4B_1300.fastq.gz,RBM4B_320.fastq.gz,RBM4B_5.fastq.gz,RBM4B_80.fastq.gz,RBMS3_input.fastq.gz		ENCODE3
RBM4B_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM4B_1300.fastq.gz,RBM4B_320.fastq.gz,RBM4B_5.fastq.gz,RBM4B_80.fastq.gz,RBMS3_input.fastq.gz		ENCODE3
RBM4B_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM4B_1300.fastq.gz,RBM4B_320.fastq.gz,RBM4B_5.fastq.gz,RBM4B_80.fastq.gz,RBMS3_input.fastq.gz		ENCODE3
RBM4B_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM4B_1300.fastq.gz,RBM4B_320.fastq.gz,RBM4B_5.fastq.gz,RBM4B_80.fastq.gz,RBMS3_input.fastq.gz		ENCODE3
RBM4B_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	RBM4B_1300.fastq.gz,RBM4B_320.fastq.gz,RBM4B_5.fastq.gz,RBM4B_80.fastq.gz,RBMS3_input.fastq.gz		ENCODE3