Experiment Information (Status: Released)

RBP	MBNL1
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	72

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
MBNL1-mockPD	CN	40-40	0	MBNL1_0.fastq.gz
MBNL1-1	RBNS	40-40	1	MBNL1_1.5.fastq.gz
MBNL1-1090	RBNS	40-40	1090	MBNL1_1090.fastq.gz
MBNL1-121	RBNS	40-40	121	MBNL1_121.fastq.gz
MBNL1-13	RBNS	40-40	13	MBNL1_13.5.fastq.gz
MBNL1-3280	RBNS	40-40	3280	MBNL1_3280.fastq.gz
MBNL1-365	RBNS	40-40	365	MBNL1_365.fastq.gz
MBNL1-4	RBNS	40-40	4	MBNL1_4.5.fastq.gz
MBNL1-40	RBNS	40-40	40	MBNL1_40.5.fastq.gz
MBNL1-9800	RBNS	40-40	9800	MBNL1_9800.fastq.gz
MBNL1-input	CN	40-40	0	MBNL1_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:MBNL1	ENCSR006QKZ	experiment	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8053
chris-burge:MBNL1-input-cntl	ENCSR070MLW	experiment	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8054
chris-burge:MBNL1-mockPD-cntl	ENCSR490PSZ	experiment	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8055
chris-burge:lib-MBNL1-1	ENCLB209VFO	library	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8333
chris-burge:lib-MBNL1-2	ENCLB203PBI	library	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8334
chris-burge:lib-MBNL1-3	ENCLB325WPL	library	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8335
chris-burge:lib-MBNL1-4	ENCLB927HCI	library	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8336
chris-burge:lib-MBNL1-5	ENCLB323QZF	library	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8337
chris-burge:lib-MBNL1-6	ENCLB658RUZ	library	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8338
chris-burge:lib-MBNL1-7	ENCLB513XUO	library	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8339
chris-burge:lib-MBNL1-8	ENCLB598LIR	library	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8340
chris-burge:lib-MBNL1-9	ENCLB436AQR	library	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8341
chris-burge:lib-MBNL1-input-cntl	ENCLB378XFX	library	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8342
chris-burge:lib-MBNL1-mockPD-cntl	ENCLB250MHS	library	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-12	ENCODE3			8343
chris-burge:MBNL1_40.5.fastq.gz	ENCFF002DGV	file_fastq	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9646
chris-burge:MBNL1_1090.fastq.gz	ENCFF002DGP	file_fastq	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9647
chris-burge:MBNL1_9800.fastq.gz	ENCFF002DGX	file_fastq	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9648
chris-burge:MBNL1_4.5.fastq.gz	ENCFF002DGW	file_fastq	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9649
chris-burge:MBNL1_13.5.fastq.gz	ENCFF002DGR	file_fastq	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9650
chris-burge:MBNL1_1.5.fastq.gz	ENCFF002DGS	file_fastq	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9651
chris-burge:MBNL1_121.fastq.gz	ENCFF002DGQ	file_fastq	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9652
chris-burge:MBNL1_3280.fastq.gz	ENCFF002DGT	file_fastq	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9653
chris-burge:MBNL1_365.fastq.gz	ENCFF002DGU	file_fastq	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9654
chris-burge:MBNL1_est_binding_frac.7mers.txt	ENCFF002DFD	file_library-fraction	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9655
chris-burge:MBNL1_est_binding_frac.5mers.txt	ENCFF002DFB	file_library-fraction	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9656
chris-burge:MBNL1_est_binding_frac.6mers.txt	ENCFF002DFC	file_library-fraction	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9657
chris-burge:MBNL1_enrichment_R.5mers.txt	ENCFF002DEY	file_enrichment	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9658
chris-burge:MBNL1_enrichment_R.7mers.txt	ENCFF002DFA	file_enrichment	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9659
chris-burge:MBNL1_enrichment_R.6mers.txt	ENCFF002DEZ	file_enrichment	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9660
chris-burge:MBNL1_input.fastq.gz	ENCFF002DGY	file_fastq	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9661
chris-burge:MBNL1_0.fastq.gz	ENCFF002DGO	file_fastq	RNA Bind-n-Seq	MBNL1		Yes	Released	2022-07-14	ENCODE3			9662

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
MBNL1.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
MBNL1_0.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
MBNL1_1.5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		MBNL1_0.fastq.gz,MBNL1_input.fastq.gz	ENCODE3
MBNL1_1090.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		MBNL1_0.fastq.gz,MBNL1_input.fastq.gz	ENCODE3
MBNL1_121.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		MBNL1_0.fastq.gz,MBNL1_input.fastq.gz	ENCODE3
MBNL1_13.5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		MBNL1_0.fastq.gz,MBNL1_input.fastq.gz	ENCODE3
MBNL1_3280.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		MBNL1_0.fastq.gz,MBNL1_input.fastq.gz	ENCODE3
MBNL1_365.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		MBNL1_0.fastq.gz,MBNL1_input.fastq.gz	ENCODE3
MBNL1_4.5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		MBNL1_0.fastq.gz,MBNL1_input.fastq.gz	ENCODE3
MBNL1_40.5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		MBNL1_0.fastq.gz,MBNL1_input.fastq.gz	ENCODE3
MBNL1_9800.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		MBNL1_0.fastq.gz,MBNL1_input.fastq.gz	ENCODE3
MBNL1_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
MBNL1_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	MBNL1_0.fastq.gz,MBNL1_1.5.fastq.gz,MBNL1_1090.fastq.gz,MBNL1_121.fastq.gz,MBNL1_13.5.fastq.gz,MBNL1_3280.fastq.gz,MBNL1_365.fastq.gz,MBNL1_4.5.fastq.gz,MBNL1_40.5.fastq.gz,MBNL1_9800.fastq.gz,MBNL1_input.fastq.gz		ENCODE3
MBNL1_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	MBNL1_0.fastq.gz,MBNL1_1.5.fastq.gz,MBNL1_1090.fastq.gz,MBNL1_121.fastq.gz,MBNL1_13.5.fastq.gz,MBNL1_3280.fastq.gz,MBNL1_365.fastq.gz,MBNL1_4.5.fastq.gz,MBNL1_40.5.fastq.gz,MBNL1_9800.fastq.gz,MBNL1_input.fastq.gz		ENCODE3
MBNL1_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	MBNL1_0.fastq.gz,MBNL1_1.5.fastq.gz,MBNL1_1090.fastq.gz,MBNL1_121.fastq.gz,MBNL1_13.5.fastq.gz,MBNL1_3280.fastq.gz,MBNL1_365.fastq.gz,MBNL1_4.5.fastq.gz,MBNL1_40.5.fastq.gz,MBNL1_9800.fastq.gz,MBNL1_input.fastq.gz		ENCODE3
MBNL1_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	MBNL1_0.fastq.gz,MBNL1_1.5.fastq.gz,MBNL1_1090.fastq.gz,MBNL1_121.fastq.gz,MBNL1_13.5.fastq.gz,MBNL1_3280.fastq.gz,MBNL1_365.fastq.gz,MBNL1_4.5.fastq.gz,MBNL1_40.5.fastq.gz,MBNL1_9800.fastq.gz,MBNL1_input.fastq.gz		ENCODE3
MBNL1_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	MBNL1_0.fastq.gz,MBNL1_1.5.fastq.gz,MBNL1_1090.fastq.gz,MBNL1_121.fastq.gz,MBNL1_13.5.fastq.gz,MBNL1_3280.fastq.gz,MBNL1_365.fastq.gz,MBNL1_4.5.fastq.gz,MBNL1_40.5.fastq.gz,MBNL1_9800.fastq.gz,MBNL1_input.fastq.gz		ENCODE3
MBNL1_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	MBNL1_0.fastq.gz,MBNL1_1.5.fastq.gz,MBNL1_1090.fastq.gz,MBNL1_121.fastq.gz,MBNL1_13.5.fastq.gz,MBNL1_3280.fastq.gz,MBNL1_365.fastq.gz,MBNL1_4.5.fastq.gz,MBNL1_40.5.fastq.gz,MBNL1_9800.fastq.gz,MBNL1_input.fastq.gz		ENCODE3