Experiment Information (Status: Released)

RBP	CELF1
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	90

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
CELF1-mockPD	CN	40-40	0	CELF1_0.fastq.gz
CELF1-1000	RBNS	40-40	1000	CELF1_1000.fastq.gz
CELF1-130	RBNS	40-40	130	CELF1_130.fastq.gz
CELF1-16	RBNS	40-40	16	CELF1_16.fastq.gz
CELF1-2000	RBNS	40-40	2000	CELF1_2000.fastq.gz
CELF1-4	RBNS	40-40	4	CELF1_4.fastq.gz
CELF1-500	RBNS	40-40	500	CELF1_500.fastq.gz
CELF1-64	RBNS	40-40	64	CELF1_64.fastq.gz
CELF1-input	CN	40-40	0	CELF1_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:CELF1	ENCSR992NHR	experiment	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-12	ENCODE3			7992
chris-burge:CELF1-input-cntl	ENCSR466KMQ	experiment	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-12	ENCODE3			7993
chris-burge:CELF1-mockPD-cntl	ENCSR219WYU	experiment	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-12	ENCODE3			7994
chris-burge:lib-CELF1-1	ENCLB707IKV	library	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-12	ENCODE3			8159
chris-burge:lib-CELF1-2	ENCLB387MCL	library	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-12	ENCODE3			8160
chris-burge:lib-CELF1-3	ENCLB334XDI	library	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-12	ENCODE3			8161
chris-burge:lib-CELF1-4	ENCLB344CBB	library	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-12	ENCODE3			8162
chris-burge:lib-CELF1-5	ENCLB335FGP	library	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-12	ENCODE3			8163
chris-burge:lib-CELF1-6	ENCLB999NDE	library	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-12	ENCODE3			8164
chris-burge:lib-CELF1-7	ENCLB311HVK	library	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-12	ENCODE3			8165
chris-burge:lib-CELF1-input-cntl	ENCLB834FLW	library	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-12	ENCODE3			8166
chris-burge:lib-CELF1-mockPD-cntl	ENCLB378PBW	library	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-12	ENCODE3			8167
chris-burge:CELF1_64.fastq.gz	ENCFF002DFR	file_fastq	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9577
chris-burge:CELF1_4.fastq.gz	ENCFF002DFP	file_fastq	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9578
chris-burge:CELF1_1000.fastq.gz	ENCFF002DFL	file_fastq	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9579
chris-burge:CELF1_16.fastq.gz	ENCFF002DFN	file_fastq	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9580
chris-burge:CELF1_130.fastq.gz	ENCFF002DFM	file_fastq	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9581
chris-burge:CELF1_2000.fastq.gz	ENCFF002DFO	file_fastq	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9582
chris-burge:CELF1_500.fastq.gz	ENCFF002DFQ	file_fastq	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9583
chris-burge:CELF1_est_binding_frac.6mers.txt	ENCFF002DEE	file_library-fraction	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9584
chris-burge:CELF1_est_binding_frac.7mers.txt	ENCFF002DEF	file_library-fraction	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9585
chris-burge:CELF1_est_binding_frac.5mers.txt	ENCFF002DED	file_library-fraction	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9586
chris-burge:CELF1_enrichment_R.6mers.txt	ENCFF002DEB	file_enrichment	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9587
chris-burge:CELF1_enrichment_R.5mers.txt	ENCFF002DEA	file_enrichment	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9588
chris-burge:CELF1_enrichment_R.7mers.txt	ENCFF002DEC	file_enrichment	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9589
chris-burge:CELF1_input.fastq.gz	ENCFF002DFS	file_fastq	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9590
chris-burge:CELF1_0.fastq.gz	ENCFF002DFK	file_fastq	RNA Bind-n-Seq	CELF1		Yes	Released	2022-07-14	ENCODE3			9591

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
CELF1.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
CELF1_0.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
CELF1_1000.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CELF1_0.fastq.gz,CELF1_input.fastq.gz	ENCODE3
CELF1_130.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CELF1_0.fastq.gz,CELF1_input.fastq.gz	ENCODE3
CELF1_16.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CELF1_0.fastq.gz,CELF1_input.fastq.gz	ENCODE3
CELF1_2000.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CELF1_0.fastq.gz,CELF1_input.fastq.gz	ENCODE3
CELF1_4.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CELF1_0.fastq.gz,CELF1_input.fastq.gz	ENCODE3
CELF1_500.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CELF1_0.fastq.gz,CELF1_input.fastq.gz	ENCODE3
CELF1_64.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		CELF1_0.fastq.gz,CELF1_input.fastq.gz	ENCODE3
CELF1_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
CELF1_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CELF1_0.fastq.gz,CELF1_1000.fastq.gz,CELF1_130.fastq.gz,CELF1_16.fastq.gz,CELF1_2000.fastq.gz,CELF1_4.fastq.gz,CELF1_500.fastq.gz,CELF1_64.fastq.gz,CELF1_input.fastq.gz		ENCODE3
CELF1_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CELF1_0.fastq.gz,CELF1_1000.fastq.gz,CELF1_130.fastq.gz,CELF1_16.fastq.gz,CELF1_2000.fastq.gz,CELF1_4.fastq.gz,CELF1_500.fastq.gz,CELF1_64.fastq.gz,CELF1_input.fastq.gz		ENCODE3
CELF1_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CELF1_0.fastq.gz,CELF1_1000.fastq.gz,CELF1_130.fastq.gz,CELF1_16.fastq.gz,CELF1_2000.fastq.gz,CELF1_4.fastq.gz,CELF1_500.fastq.gz,CELF1_64.fastq.gz,CELF1_input.fastq.gz		ENCODE3
CELF1_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CELF1_0.fastq.gz,CELF1_1000.fastq.gz,CELF1_130.fastq.gz,CELF1_16.fastq.gz,CELF1_2000.fastq.gz,CELF1_4.fastq.gz,CELF1_500.fastq.gz,CELF1_64.fastq.gz,CELF1_input.fastq.gz		ENCODE3
CELF1_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CELF1_0.fastq.gz,CELF1_1000.fastq.gz,CELF1_130.fastq.gz,CELF1_16.fastq.gz,CELF1_2000.fastq.gz,CELF1_4.fastq.gz,CELF1_500.fastq.gz,CELF1_64.fastq.gz,CELF1_input.fastq.gz		ENCODE3
CELF1_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	CELF1_0.fastq.gz,CELF1_1000.fastq.gz,CELF1_130.fastq.gz,CELF1_16.fastq.gz,CELF1_2000.fastq.gz,CELF1_4.fastq.gz,CELF1_500.fastq.gz,CELF1_64.fastq.gz,CELF1_input.fastq.gz		ENCODE3