SNUPN      CRISPR in K562      Batch: BGKcLV53

Experiment Information (Status: Sequencing)
BGKcLV53-131BGKcLV53-131BGKcLV53-132BGKcLV53-132
idx0000
TRCN#_or_BGC#BGC#0001553BGC#0001553BGC#0001553BGC#0001553
shRNA_or_gRNA_sequenceCTGGATGTGATGTGCTGGCGCTGGATGTGATGTGCTGGCGCTGGATGTGATGTGCTGGCGCTGGATGTGATGTGCTGGCG
PAMGGGGGGGGGGGG
NameSNUPN_77SNUPN_77SNUPN_77SNUPN_77
Sample_IDBGKcLV53-131BGKcLV53-131BGKcLV53-132BGKcLV53-132
transduction_Date2/24/262/24/262/24/262/24/26
daysD6D6D6D6
RBP_nameSNUPNSNUPNSNUPNSNUPN
qPCR_result49.552.8
Ave_qPCR51.2
RT-qPCR_primer-Ftgaagaaatggacattgacactg
RT-qPCR_primer-Rtccattcctgccccaaatct
protein_conc4667466744504450
WB_result78.585.165.189.3575
Ave_WB
WB_DONE_date4/17/26,4/6/265/7/26
MW41kd41kd
IP
antibody_Cat#A305-567AA305-568ALOT #1LOT #1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM0000
Rep2_TPM0000
ActionReadyReady
Library_start_date
repeat_library
Note
ID6493649564946496




Western Blot
RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
SNUPNProduct_ID: A305-567A
Lot_ID: 1
Source: Bethyl Labs
Target Name: SNUPN-human		 SNUPN-K562-CRISPR-A305-567A.png<br>Caption: Western blot following CRISPR against SNUPN in K562 whole cell lysate using SNUPN specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against SNUPN. SNUPN protein appears as the green arrow, Tubulin serves as a control and appears in red arrow.
SNUPNProduct_ID: A305-568A
Lot_ID: 1
Source: Bethyl Labs
Target Name: SNUPN-human		 SNUPN-K562-CRISPR-A305-568A.png<br>Caption: Western blot following CRISPR against SNUPN in K562 whole cell lysate using SNUPN specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against SNUPN. SNUPN protein appears as the green arrow, Tubulin serves as a control and appears in red arrow.




Experiment Status
BGKcLV53-131BGKcLV53-131BGKcLV53-132BGKcLV53-132
Sample_IDBGKcLV53-131BGKcLV53-131BGKcLV53-132BGKcLV53-132
Sample Name
Sample NameSNUPN-BGKcLV53-131SNUPN-BGKcLV53-132
RBPSNUPNSNUPNSNUPNSNUPN
Cell_LineK562K562K562K562
Exp UID
StatusSequencingNotSatisfiedSequencingNotSatisfied
Status_date2026-06-022026-05-182026-06-022026-05-18
ProjectENCORE2ENCORE2ENCORE2ENCORE2
Note
ID14804149221480514923




Library-Prep Information
BGKcLV53-131BGKcLV53-132
Sample #5556
Sample NameSNUPN-BGKcLV53-131SNUPN-BGKcLV53-132
Sample_Name_Alias
Index Well PositionE08F08
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2026-05-262026-05-26
Lib_IDLib-260526Lib-260526
Tecan_Location
Tecan
Tecan_date
Size_bp282285
Peak_Molarity71.2063.30
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2026-05-272026-05-27
Sample_IDBGKcLV53-131BGKcLV53-132
RBPSNUPNSNUPN
Batch_IDBGKcLV53BGKcLV53
WB_result78.50065.100
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID48944895




Sequencing Information
Sequencing info was not avaliable




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database