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SETD1A
CRISPR
in K562
Control:
NT-BGKcLV33
General Information
Experiment Information
Sequencing Information
Data Submission
Files
General Information
RBP
SETD1A
Cell_Line
K562
Method
CRISPR
Exp_Name
SETD1A-BGKcLV33-K562
ENCODE_series_ID
ENCSR438ODL
Batch_ID
BGKcLV33
Pool ID
Pool-220418
Local_Set_Name
set53
ENCODE_KD_Exp_ID
ENCSR558XPA
ENCODE_CN_Exp_ID
ENCSR271ZAB
Rep1
SETD1A-BGKcLV33-49
Rep2
SETD1A-BGKcLV33-50
CN1
NT-BGKcLV33-1
CN2
NT-BGKcLV33-2
Rep1_qPCR
Rep2_qPCR
Rep1_WB
85.7
Rep2_WB
91.9
Antibody Cat#
A300-614A
Antibody Lot#
LOT #3
Antibody DCC ID
Status
Submitted
Project
ENCODE4
ID
906
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
NotSatisfied
)
BGKcLV33-43
BGKcLV33-43
BGKcLV33-44
BGKcLV33-44
idx
1145
1230
1146
1231
TRCN#_or_BGC#
BGC#0000861
BGC#0000856
BGC#0000861
BGC#0000856
shRNA_or_gRNA_sequence
TAGCGGTACACCTTCTGAGA
GTGACACGTACCTTTTGGGT
TAGCGGTACACCTTCTGAGA
GTGACACGTACCTTTTGGGT
PAM
AGG
AGG
AGG
AGG
Name
SETD1A_91
SECISBP2_91
SETD1A_91
SECISBP2_91
Sample_ID
BGKcLV33-43
BGKcLV33-43
BGKcLV33-44
BGKcLV33-44
transduction_Date
12/7/21
2/22/22
12/7/21
2/22/22
days
D6
D6
D6
D6
RBP_name
SETD1A
SECISBP2
SETD1A
SECISBP2
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
416
2562
505
2621
WB_result
no band on the position
0.0
0.0
Ave_WB
0.0
WB_DONE_date
1/24/22
3/16/22
MW
186kd
95kd
IP
antibody_Cat#
A300-290A
A303-949A
LOT #2
LOT #1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
0
0
Rep2_TPM
0
0
0
0
Action
Library_start_date
repeat_library
Note
ID
5285
5372
5286
5373
Western Blot
Western Blot info was not avaliable
Experiment Status
BGKcLV33-43
BGKcLV33-43
BGKcLV33-44
BGKcLV33-44
Sample_ID
BGKcLV33-43
BGKcLV33-43
BGKcLV33-44
BGKcLV33-44
Sample Name
Sample Name
RBP
SETD1A
SECISBP2
SETD1A
SECISBP2
Cell_Line
K562
K562
K562
K562
Exp UID
Status
NotSatisfied
NotSatisfied
NotSatisfied
NotSatisfied
Status_date
2022-03-30
2022-03-30
2022-03-30
2022-03-30
Project
ENCODE4
ENCODE4
ENCODE4
ENCODE4
Note
ID
10729
10779
10730
10780
Library-Prep
Sequencing
Library-Prep Information
Library info was not avaliable
Sequencing Information
Sequencing info was not avaliable
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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