CACYBP      CRISPR in HepG2      Batch: BGHcLV50

Experiment Information (Status: Sequenced)
BGHcLV50-11BGHcLV50-11BGHcLV50-12BGHcLV50-12
idx0000
TRCN#_or_BGC#BGC#0001401BGC#0001401BGC#0001401BGC#0001401
shRNA_or_gRNA_sequenceACGGATCTCGAACCTTCGCGACGGATCTCGAACCTTCGCGACGGATCTCGAACCTTCGCGACGGATCTCGAACCTTCGCG
PAMAGGAGGAGGAGG
NameCACYBP_99UCACYBP_99UCACYBP_99UCACYBP_99U
Sample_IDBGHcLV50-11BGHcLV50-11BGHcLV50-12BGHcLV50-12
transduction_Date7/29/257/29/257/29/257/29/25
daysD6D6D6D6
RBP_nameCACYBPCACYBPCACYBPCACYBP
qPCR_result45.345.362.862.8
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc3206320630763076
WB_result51.157.652.857.3
Ave_WB
WB_DONE_date8/11/25,8/19/2510/10/25
MW26kDa26kDa
IPRabbit / I
antibody_Cat#A302-904AA302-905ALOT# 1LOT# 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM0000
Rep2_TPM0000
ActionReadyReady
Library_start_date
repeat_library
Note
ID10011100131001210014




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV50-11BGHcLV50-12
Sample_IDBGHcLV50-11BGHcLV50-12
Sample Name
Sample NameCACYBP-BGHcLV50-11CACYBP-BGHcLV50-12
RBPCACYBPCACYBP
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-10-302025-10-30
ProjectENCORE2ENCORE2
Note
ID1445014451




Library-Prep Information
BGHcLV50-11BGHcLV50-12
Sample #34
Sample NameCACYBP-BGHcLV50-11CACYBP-BGHcLV50-12
Sample_Name_Alias
Index Well PositionC10D10
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-10-012025-10-01
Lib_IDLib-251001Lib-251001
Tecan_Location
Tecan
Tecan_date
Size_bp286285
Peak_Molarity58.9058.30
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-10-032025-10-03
Sample_IDBGHcLV50-11BGHcLV50-12
RBPCACYBPCACYBP
Batch_IDBGHcLV50BGHcLV50
WB_result51.10052.800
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID48184819




Sequencing Information
BGHcLV50-11BGHcLV50-12
Sample_IDBGHcLV50-11BGHcLV50-12
Sample NameCACYBP-BGHcLV50-11CACYBP-BGHcLV50-12
Pool IDPool-251003Pool-251003
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34733474




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database