SYNCRIP      CRISPR in HepG2      Batch: BGHcLV47

Experiment Information (Status: Sequenced)
BGHcLV47-79BGHcLV47-80
idx00
TRCN#_or_BGC#BGC#0000104BGC#0000104
shRNA_or_gRNA_sequenceGTGGAGTCATGAAGACTTACGTGGAGTCATGAAGACTTAC
PAMAGGAGG
NameSYNCRIP-73-1SYNCRIP-73-1
Sample_IDBGHcLV47-79BGHcLV47-80
transduction_Date1/28/251/28/25
daysD6D6
RBP_nameSYNCRIPSYNCRIP
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc46165228
WB_result77.277.6
Ave_WB
WB_DONE_date2/6/25
MW70kD
IPfu's
antibody_Cat#RN046PW
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID98669867




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV47-79BGHcLV47-80
Sample_IDBGHcLV47-79BGHcLV47-80
Sample Name
Sample NameSYNCRIP-BGHcLV47-79SYNCRIP-BGHcLV47-80
RBPSYNCRIPSYNCRIP
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-05-142025-05-14
ProjectENCORE2ENCORE2
Note
ID1417614177




Library-Prep Information
BGHcLV47-79BGHcLV47-80
Sample #2930
Sample NameSYNCRIP-BGHcLV47-79SYNCRIP-BGHcLV47-80
Sample_Name_Alias
Index Well PositionE11F11
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-04-232025-04-23
Lib_IDLib-250423Lib-250423
Tecan_Location
Tecan
Tecan_date
Size_bp273268
Peak_Molarity92.4085.20
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-04-222025-04-22
Sample_IDBGHcLV47-79BGHcLV47-80
RBPSYNCRIPSYNCRIP
Batch_IDBGHcLV47BGHcLV47
WB_result77.20077.600
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID47404741




Sequencing Information
BGHcLV47-79BGHcLV47-80
Sample_IDBGHcLV47-79BGHcLV47-80
Sample NameSYNCRIP-BGHcLV47-79SYNCRIP-BGHcLV47-80
Pool IDPool-250422Pool-250422
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34433444




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database