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APTX
CRISPR
in HepG2
Control:
NT-BGHcLV24
General Information
Experiment Information
Sequencing Information
Data Submission
Files
General Information
RBP
APTX
Cell_Line
HepG2
Method
CRISPR
Exp_Name
APTX-BGHcLV24-HepG2
ENCODE_series_ID
ENCSR731TJP
Batch_ID
BGHcLV24
Pool ID
Pool-210622
Local_Set_Name
set47
ENCODE_KD_Exp_ID
ENCSR489DNH
ENCODE_CN_Exp_ID
ENCSR671FDZ
Rep1
APTX-BGHcLV24-11
Rep2
APTX-BGHcLV24-12
CN1
NT-BGHcLV24-1
CN2
NT-BGHcLV24-2
Rep1_qPCR
0.0
Rep2_qPCR
0.0
Rep1_WB
76.0
Rep2_WB
77.0
Antibody Cat#
PA5-92422
Antibody Lot#
LOT# UK2881303A
Antibody DCC ID
ENCAB069JSS
Status
Released
Project
ENCODE4
ID
3
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
NotSatisfied
)
BGHcLV24-13
BGHcLV24-14
idx
671
672
TRCN#_or_BGC#
BGC#0000565
BGC#0000565
shRNA_or_gRNA_sequence
ACCTCATACTCGGAATGGCG
ACCTCATACTCGGAATGGCG
PAM
tgg
tgg
Name
APTX_97b
APTX_97b
Sample_ID
BGHcLV24-13
BGHcLV24-14
transduction_Date
10/30/20
10/30/20
days
D6
D6
RBP_name
APTX
APTX
qPCR_result
0.0
0.0
Ave_qPCR
0.0
RT-qPCR_primer-F
gccattccgagtatgagcca
RT-qPCR_primer-R
ccagcctcttgtaccatctcg
protein_conc
3643
3398
WB_result
71.0
74.0
Ave_WB
72.5
WB_DONE_date
11/9/20
MW
40.7KD
IP
Rabbit / I
antibody_Cat#
PA5-92422
LOT# UK2881303A
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Library_start_date
repeat_library
Note
ID
6826
6827
Western Blot
Western Blot info was not avaliable
Experiment Status
BGHcLV24-13
BGHcLV24-14
Sample_ID
BGHcLV24-13
BGHcLV24-14
Sample Name
Sample Name
RBP
APTX
APTX
Cell_Line
HepG2
HepG2
Exp UID
Status
NotSatisfied
NotSatisfied
Status_date
2021-06-01
2021-06-01
Project
ENCODE4
ENCODE4
Note
ID
7807
7808
Library-Prep
Sequencing
Library-Prep Information
Library info was not avaliable
Sequencing Information
Sequencing info was not avaliable
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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