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SSB
shRNA
in HepG2
Control:
NT_BGHLV37-1
General Information
Experiment Information
Sequencing Information
Data Submission
Files
General Information
RBP
SSB
Cell_Line
HepG2
Method
shRNA
Exp_Name
SSB-BGHLV37-HepG2
ENCODE_series_ID
ENCSR623QDI
Batch_ID
BGHLV37
Pool ID
Pool-161129
Local_Set_Name
set37
ENCODE_KD_Exp_ID
ENCSR278CHI
ENCODE_CN_Exp_ID
ENCSR997HCQ
Rep1
SSB_BGHLV37-61
Rep2
SSB_BGHLV37-62
CN1
NT_BGHLV37-1
CN2
NT_BGHLV37-2
Rep1_qPCR
67.4
Rep2_qPCR
71.9
Rep1_WB
55.5
Rep2_WB
59.4
Antibody Cat#
RN074PW
Antibody Lot#
RN074PW
Antibody DCC ID
ENCAB214FIO
Status
Released
Project
ENCODE3
ID
754
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
NotSatisfied
)
BGHLV37-63
BGHLV37-64
idx
975
976
TRCN#_or_BGC#
TRCN0000062195
TRCN0000062195
shRNA_or_gRNA_sequence
CCTGCATCCAAACAACAGAAA
CCTGCATCCAAACAACAGAAA
PAM
Name
SSB
SSB
Sample_ID
BGHLV37-63
BGHLV37-64
transduction_Date
9/1/16
9/1/16
days
RBP_name
SSB
SSB
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
3592
3549
WB_result
52.9
53.5
Ave_WB
53.2
WB_DONE_date
9/15/16
MW
IP
1
1
antibody_Cat#
RN074PW
RN074PW
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
174.5
0
Rep2_TPM
147.1
0
Action
Library_start_date
repeat_library
Note
ID
3068
3069
Western Blot
Western Blot info was not avaliable
Experiment Status
BGHLV37-63
BGHLV37-64
Sample_ID
BGHLV37-63
BGHLV37-64
Sample Name
Sample Name
RBP
SSB
SSB
Cell_Line
HepG2
HepG2
Exp UID
Status
NotSatisfied
NotSatisfied
Status_date
2019-06-26
2019-06-26
Project
ENCODE3
ENCODE3
Note
ID
2289
2290
Library-Prep
Sequencing
Library-Prep Information
Library info was not avaliable
Sequencing Information
Sequencing info was not avaliable
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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