ZRANB2      shRNA in 293T      Batch: BG293LV06

Experiment Information (Status: Sequenced)
BG293LV06-113BG293LV06-114
idx00
TRCN#_or_BGC#TRCN0000013427TRCN0000013427
shRNA_or_gRNA_sequenceCCGGCTTCACATTCACGATCTTCATCTCGAGATGAAGATCGTGAATGTGAAGTTTTTCCGGCTTCACATTCACGATCTTCATCTCGAGATGAAGATCGTGAATGTGAAGTTTTT
PAM
NameZRANB2ZRANB2
Sample_IDBG293LV06-113BG293LV06-114
transduction_Date9/5/249/5/24
daysD4D4
RBP_nameZRANB2ZRANB2
qPCR_result81.179.4
Ave_qPCR80.2
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc00
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID1020010201




Western Blot
Western Blot info was not avaliable




Experiment Status
BG293LV06-113BG293LV06-114
Sample_IDBG293LV06-113BG293LV06-114
Sample Name
Sample NameZRANB2-BG293LV06-113BZRANB2-BG293LV06-114B
RBPZRANB2ZRANB2
Cell_Line293T293T
Exp UID
StatusSequencedSequenced
Status_date2024-10-162024-10-16
ProjectENCORE2ENCORE2
Note
ID1355013551




Library-Prep Information
BG293LV06-113BG293LV06-114
Sample #113114
Sample NameZRANB2-BG293LV06-113BZRANB2-BG293LV06-114B
Sample_Name_Alias
Index Well PositionA08B08
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2024-10-022024-10-02
Lib_IDLib-241002Lib-241002
Tecan_Location
Tecan
Tecan_date
Size_bp280281
Peak_Molarity78.1076.90
libSampleQC_DNA_WellDNA_Library_set72/set1/A8.pngDNA_Library_set72/set1/B8.png
RIN9.89.8
libSample_RNA_WellRNA_Library_set72/set1/A8.pngRNA_Library_set72/set1/B8.png
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2024-10-042024-10-04
Sample_IDBG293LV06-113BG293LV06-114
RBPZRANB2ZRANB2
Batch_IDBG293LV06BG293LV06
WB_result0.0000.000
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_SuffixBB
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID45384539




Sequencing Information
BG293LV06-113BG293LV06-114
Sample_IDBG293LV06-113BG293LV06-114
Sample NameZRANB2-BG293LV06-113BZRANB2-BG293LV06-114B
Pool IDPool-241004Pool-241004
LocalServer_folderset72set72
total_reads32,274,64350,081,239
total_aligned_reads29,919,38346,866,263
unique_aligned_reads28,120,05944,081,832
percent_uniqueAligned0.871270.88021
correlation_replicates0.9983370.998337
spikein_reads137,070218,990
percent_spikeins0.004250.00437
original_ReadLength101101
QC_StatusReadyToSubmitReadyToSubmit
ID31073108




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database