ZNF2

General Information

Gene Name       : ZNF2
Gene ID             : ENSG00000275111.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF2ENSG00000275111.42.922.812.87ENCSR000AEF
HepG2ZNF2ENSG00000275111.44.235.224.72ENCSR985KAT
K562ZNF2ENSG00000275111.42.052.262.15ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq ZNF2-BGRSLV03-RS293ZNF2Ribo-STAMP-293TReleased   shRNAKD% = ,






  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
ZNF2Ribo-STAMP-293TshRNAZNF2-BGRSLV03-57,ZNF2-BGRSLV03-58NT-BGRSLV03-1,NT-BGRSLV03-2,ReleasedENCORE2
ZNF2Ribo-STAMP-293TshRNABGRSDLV02-69,BGRSDLV02-70BGRSDLV02-1,BGRSDLV02-2NotSatisfiedENCORE2
ZNF2Ribo-STAMP-293TshRNABGRSDLV02-71dox,BGRSDLV02-72doxBGRSDLV02-1,BGRSDLV02-2NotSatisfiedENCORE2
ZNF2Ribo-STAMP-293TshRNABGRSDLV04-49,BGRSDLV04-50BGRSDLV04-1,BGRSDLV04-2NotSatisfiedENCORE2
ZNF2Ribo-STAMP-293TshRNABGRSDLV04-51dox,BGRSDLV04-52doxBGRSDLV04-1,BGRSDLV04-2NotSatisfiedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF2 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on ZNF2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ZNF2 is not avaliable on ENCORE database.






NO known proteins are bound to ZNF2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ZNF2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF2 is not available on ENCORE database.

  • 19 RBPs can affect the levels of ZNF2.  








The Knockdown/knockout RNA-Seq assay for ZNF2 is not available on ENCORE database.





19 RBPs can affect the gene expression of ZNF2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF2ENSG00000163067.10119.26300174.67410-0.550502.218401.58220HepG2DNAJC21
ZNF2ENSG00000163067.10127.49850223.83830-0.812003.908302.83820HepG2G3BP2
ZNF2ENSG00000163067.10110.88370194.85900-0.813404.736803.96090HepG2HNRNPU
ZNF2ENSG00000163067.10154.20330227.37570-0.560202.201001.61330HepG2MAGOH
ZNF2ENSG00000163067.10150.94730215.28210-0.512202.107401.51760HepG2PUM2
ZNF2ENSG00000163067.10313.75190225.782500.474602.428501.93440HepG2RBM22
ZNF2ENSG00000163067.10361.75580242.013900.579802.743402.07220HepG2SF3A3
ZNF2ENSG00000163067.10127.89790189.33490-0.565902.378701.90870HepG2TIAL1
ZNF2ENSG00000163067.10323.12400192.631600.746104.282203.50990HepG2U2AF1
ZNF2ENSG00000163067.1071.71030120.44750-0.748202.533001.90700K562AKAP8L
ZNF2ENSG00000163067.10322.45510142.234201.180708.542507.60340K562AQR
ZNF2ENSG00000163067.10280.62440168.189900.738403.256602.55870K562DDX47
ZNF2ENSG00000163067.10102.4410064.170400.674702.029901.32400K562EIF4A3
ZNF2ENSG00000163067.10138.7232066.735901.055605.002504.22360K562FXR1
ZNF2ENSG00000163067.10163.2658076.635001.091004.878803.88540K562PRPF8
ZNF2ENSG00000163067.10305.96210195.226700.648103.519902.60200K562PUF60
ZNF2ENSG00000163067.1049.46750119.48110-1.272205.040204.33520K562PUS1
ZNF2ENSG00000163067.10160.4897086.858300.885604.007403.16210K562SRSF1
ZNF2ENSG00000163067.10147.5328098.606400.581202.056001.34690K562SYNCRIP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ZNF2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ZNF2 is not avaliable on ENCORE database.