TMPRSS5

General Information

Gene Name       : TMPRSS5
Gene ID             : ENSG00000166682.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMPRSS5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMPRSS5ENSG00000166682.110.000.230.12ENCSR000AEF
HepG2TMPRSS5ENSG00000166682.110.510.360.43ENCSR985KAT
K562TMPRSS5ENSG00000166682.110.060.050.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMPRSS5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMPRSS5 RNA is bound by 1 proteins.  







eCLIP assay for TMPRSS5 is not avaliable on ENCORE database.





1 proteins are bound to TMPRSS5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11113563115113563225-intron-Distal4.008214.51091HepG2HNRNPL
chr11113562931113563056-intron-Distal4.907865.30852HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMPRSS5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMPRSS5 is not available on ENCORE database.

  • 9 RBPs can affect the levels of TMPRSS5.  








The Knockdown/knockout RNA-Seq assay for TMPRSS5 is not available on ENCORE database.





9 RBPs can affect the gene expression of TMPRSS5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMPRSS5ENSG00000166682.635.263409.166001.943702.981101.83650HepG2CPSF7
TMPRSS5ENSG00000166682.671.9702010.839302.731008.457607.43280HepG2DDX6
TMPRSS5ENSG00000166682.69.3557030.91260-1.724302.439701.64530HepG2EIF4G1
TMPRSS5ENSG00000166682.643.9022016.565501.406002.651001.55620HepG2FUS
TMPRSS5ENSG00000166682.636.3626011.925301.608302.925902.30490HepG2PCBP1
TMPRSS5ENSG00000166682.66.7071026.59200-1.987202.708702.19440HepG2RBM22
TMPRSS5ENSG00000166682.636.8484010.729201.780003.591602.98080HepG2SRSF9
TMPRSS5ENSG00000166682.64.3298026.08080-2.590603.739703.16370HepG2SSB
TMPRSS5ENSG00000166682.63.3877020.74230-2.614203.089702.56600HepG2TIAL1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMPRSS5 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TMPRSS5 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TMPRSS5 is not avaliable on ENCORE database.