RP1-228P16.4

General Information

Gene Name : RP1-228P16.4
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP1-228P16.4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP1-228P16.4 is not avaliable on ENCORE database.

Proteins bound to RNA

RP1-228P16.4 RNA is bound by 2 proteins.

eCLIP assay for RP1-228P16.4 is not avaliable on ENCORE database.

2 proteins are bound to RP1-228P16.4 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	48416493	48416508	+	intron-Distal	5.44080	5.33380	HepG2	DHX30
chr12	48416493	48416508	+	intron-Distal	6.16205	8.60773	K562	GNL3
chr12	48416489	48416493	+	intron-Distal	5.44080	5.33380	HepG2	DHX30
chr12	48416489	48416493	+	intron-Distal	6.16205	8.60773	K562	GNL3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP1-228P16.4 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP1-228P16.4 is not available on ENCORE database.
3 RBPs can affect the levels of RP1-228P16.4.

The Knockdown/knockout RNA-Seq assay for RP1-228P16.4 is not available on ENCORE database.

3 RBPs can affect the gene expression of RP1-228P16.4 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP1-228P16.4	ENSG00000257985.1	10.11920	0.32010	4.98240	2.37700	1.73590	HepG2	RPLP0
RP1-228P16.4	ENSG00000257985.1	12.00100	0.00000	99999.99990	3.18160	2.52890	HepG2	RPS19
RP1-228P16.4	ENSG00000257985.1	6.86020	0.00000	99999.99990	1.99830	1.55870	HepG2	TIAL1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP1-228P16.4

General Information

Functions

Localization

Domains (AlphaFold: RP1-228P16.4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP1-228P16.4 is not avaliable on ENCORE database.

2 proteins are bound to RP1-228P16.4 RNA:

eCLIP assay for RP1-228P16.4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP1-228P16.4 is not available on ENCORE database.

3 RBPs can affect the gene expression of RP1-228P16.4 :

The Knockdown/knockout RNA-Seq assay for RP1-228P16.4 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP1-228P16.4 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP1-228P16.4 is not avaliable on ENCORE database.