RNF150

General Information

Gene Name       : RNF150
Gene ID             : ENSG00000170153.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RNF150)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RNF150ENSG00000170153.100.010.010.01ENCSR000AEF
HepG2RNF150ENSG00000170153.100.030.010.02ENCSR985KAT
K562RNF150ENSG00000170153.100.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
RNF150Ribo-STAMP-293TshRNARNF150-BGRSLV05-7,RNF150-BGRSLV05-8NT-BGRSLV05-1,NT-BGRSLV05-2,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RNF150 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on RNF150 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RNF150 is not avaliable on ENCORE database.






NO known proteins are bound to RNF150 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RNF150 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RNF150 is not available on ENCORE database.

  • 6 RBPs can affect the levels of RNF150.  








The Knockdown/knockout RNA-Seq assay for RNF150 is not available on ENCORE database.





6 RBPs can affect the gene expression of RNF150 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RNF150ENSG00000170153.688.051201.834305.5849017.5004016.28100HepG2AKAP1
RNF150ENSG00000170153.60.5556010.07650-4.180802.031301.48300HepG2HNRNPLL
RNF150ENSG00000170153.627.760108.377801.728302.588802.00310HepG2HNRNPU
RNF150ENSG00000170153.621.422901.890403.502303.795203.08570HepG2RPS19
RNF150ENSG00000170153.60.000007.68200-99999.999992.416801.52520HepG2SMNDC1
RNF150ENSG00000170153.652.324702.538104.3656012.1129011.06780HepG2TAF15
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RNF150 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RNF150 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RNF150 is not avaliable on ENCORE database.