PLXDC1

General Information

Gene Name : PLXDC1
Gene ID : ENSG00000161381.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PLXDC1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PLXDC1	ENSG00000161381.13	0.02	0.01	ENCSR000AEF
HepG2	PLXDC1	ENSG00000161381.13	0.00	0.00	ENCSR985KAT
K562	PLXDC1	ENSG00000161381.13	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PLXDC1 is not avaliable on ENCORE database.

Proteins bound to RNA

PLXDC1 RNA is bound by 5 proteins.

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eCLIP assay for PLXDC1 is not avaliable on ENCORE database.

5 proteins are bound to PLXDC1 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	37309970	37309987	-	intron-Distal	7.67250	400.00000	K562	NSUN2
chr17	37309987	37310002	-	intron-Distal	7.67179	400.00000	K562	NSUN2
chr17	37309969	37310001	-	intron-Distal	4.18810	11.65624	HepG2	XPO5
chr17	37310002	37310005	-	intron-Distal	3.99193	11.56473	K562	NSUN2
chr17	37309974	37310023	-	intron-Distal	4.55640	10.95768	K562	XRCC6
chr17	37309960	37309989	-	intron-Distal	3.35625	4.37857	K562	HNRNPM
chr17	37309989	37310016	-	intron-Distal	3.28182	4.37857	K562	HNRNPM
chr17	37309972	37309990	-	intron-Distal	3.16626	3.51906	K562	TBRG4
chr17	37309990	37310022	-	intron-Distal	3.07028	3.08949	K562	TBRG4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 9 of 9 entries

eCLIP assay for PLXDC1 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for PLXDC1 is not available on ENCORE database.
1 RBPs can affect the levels of PLXDC1.

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The Knockdown/knockout RNA-Seq assay for PLXDC1 is not available on ENCORE database.

1 RBPs can affect the gene expression of PLXDC1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PLXDC1	ENSG00000161381.9	6.91150	0.00000	99999.99990	1.80250	1.30890	K562	AQR
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PLXDC1

General Information

Functions

Localization

Domains (AlphaFold: PLXDC1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PLXDC1 is not avaliable on ENCORE database.

5 proteins are bound to PLXDC1 RNA:

eCLIP assay for PLXDC1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PLXDC1 is not available on ENCORE database.

1 RBPs can affect the gene expression of PLXDC1 :

The Knockdown/knockout RNA-Seq assay for PLXDC1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of PLXDC1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for PLXDC1 is not avaliable on ENCORE database.