ST8SIA1

General Information

Gene Name       : ST8SIA1
Gene ID             : ENSG00000111728.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ST8SIA1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ST8SIA1ENSG00000111728.100.000.010.01ENCSR000AEF
HepG2ST8SIA1ENSG00000111728.100.000.000.00ENCSR985KAT
K562ST8SIA1ENSG00000111728.102.362.612.48ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ST8SIA1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on ST8SIA1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ST8SIA1 is not avaliable on ENCORE database.






NO known proteins are bound to ST8SIA1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ST8SIA1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ST8SIA1 is not available on ENCORE database.

  • 3 RBPs can affect the levels of ST8SIA1.  








The Knockdown/knockout RNA-Seq assay for ST8SIA1 is not available on ENCORE database.





3 RBPs can affect the gene expression of ST8SIA1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ST8SIA1ENSG00000111728.610.208500.0000099999.999902.638901.89270HepG2CNOT7
ST8SIA1ENSG00000111728.638.9590012.631501.624802.813201.52100K562EEF2
ST8SIA1ENSG00000111728.688.1670025.938801.765004.286601.62240K562DROSHA
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ST8SIA1 is not available on ENCORE database.





2 RBPs can affect the splicing of ST8SIA1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEST8SIA1ENSG00000111728.6chr12-222217962222195422219278222193692222350522223547-0.155000.002170.05657excludedK562AKAP8L
SEST8SIA1ENSG00000111728.6chr12-222217962222195422219278222193692222350522223547-0.314000.000000.00000excludedK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ST8SIA1 is not avaliable on ENCORE database.