LRP1B

General Information

Gene Name       : LRP1B
Gene ID             : ENSG00000168702.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LRP1B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LRP1BENSG00000168702.170.000.000.00ENCSR000AEF
HepG2LRP1BENSG00000168702.170.000.000.00ENCSR985KAT
K562LRP1BENSG00000168702.170.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LRP1B is not avaliable on ENCORE database.



Proteins bound to RNA
  • LRP1B RNA is bound by 1 proteins.  







eCLIP assay for LRP1B is not avaliable on ENCORE database.





1 proteins are bound to LRP1B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2141612267141612272-intron-Distal10.16335300.11562K562NSUN2
chr2141612249141612259-intron-Distal10.16335300.11562K562NSUN2
chr2141612263141612267-intron-Distal10.16335300.11562K562NSUN2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LRP1B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LRP1B is not available on ENCORE database.

  • 1 RBPs can affect the levels of LRP1B.  








The Knockdown/knockout RNA-Seq assay for LRP1B is not available on ENCORE database.





1 RBPs can affect the gene expression of LRP1B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LRP1BENSG00000168702.127.076200.0000099999.999902.248501.50940HepG2EIF4G2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LRP1B is not available on ENCORE database.






No RBPs affect the alternative splcing events of LRP1B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LRP1B is not avaliable on ENCORE database.