KHDRBS2

General Information

Gene Name       : KHDRBS2
Gene ID             : ENSG00000112232.8
Essential Gene : No

Functions

Localization(RBPImage: KHDRBS2)

Domains (AlphaFold: KHDRBS2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KHDRBS2ENSG00000112232.80.000.000.00ENCSR000AEF
HepG2KHDRBS2ENSG00000112232.80.020.010.01ENCSR985KAT
K562KHDRBS2ENSG00000112232.80.000.000.00ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
RNA Bind-n-SeqRBNS: KHDRBS2ENCSR575QYEKHDRBS2cell-free sampleReleased






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
KHDRBS2ENCAB000BFURN041P1NotSatisfied, ENCODE3


  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  
  GeneName    gene_aliases    Status    Project    Note  
KHDRBS2KHDRBS2ReleasedENCODE3


  Localization Image in HepG2  
    KHDRBS2: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Nucleolus
  • Cytoplasm
  • Cytoskeleton
  • Microtubule
  • Cytosolic












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    KHDRBS2Product_ID: RN041P
    Lot_ID: 1
    Source: MBLI
    Target Name: KHDRBS2-human    		 MBLI_RN041P_001_KHDRBS2.png<br>Caption: IP-WB analysis of K562 whole cell lysate using KHDRBS2 specific antibody. Lane 1 is 2.5% of 0.5mg input lysate, lane 2 is 2.5% of supernatant after immunoprecipitation and Lane 3 is 50% of IP enrichment using rabbit polyclonal Anti-KHDRBS2(SLM1)(Human)pAb. This antibody passes preliminary validation and will be further pursued for primary and secondary validation.








    RNA Targets

    • eCLIP assay for KHDRBS2 is not avaliable on ENCORE database.


    • The binding motifs of KHDRBS2

      • Trulli

    Proteins bound to RNA

    • NO known proteins bind on KHDRBS2 RNA with finished eCLIP experiments on ENCORE database.





    eCLIP assay for KHDRBS2 is not avaliable on ENCORE database.






    NO known proteins are bound to KHDRBS2 RNA with finished eCLIP experiments on ENCORE database.





    eCLIP assay for KHDRBS2 is not avaliable on ENCORE database.



    Diffrential Expression

    • The Knockdown/knockout assay for KHDRBS2 is not available on ENCORE database.

    • No RBPs affect the gene expression of KHDRBS2 on ENCORE database.


    The Knockdown/knockout RNA-Seq assay for KHDRBS2 is not available on ENCORE database.






    No RBPs affect the gene expression of KHDRBS2 on ENCORE database.






    The Knockdown/knockout RNA-Seq assay for KHDRBS2 is not available on ENCORE database.






    No RBPs affect the alternative splcing events of KHDRBS2 on ENCORE database.





    The Knockdown/knockout RNA-Seq assay for KHDRBS2 is not avaliable on ENCORE database.