HOXA11

General Information

Gene Name       : HOXA11
Gene ID             : ENSG00000005073.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HOXA11)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HOXA11ENSG00000005073.50.000.000.00ENCSR000AEF
HepG2HOXA11ENSG00000005073.50.000.030.01ENCSR985KAT
K562HOXA11ENSG00000005073.50.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HOXA11 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on HOXA11 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for HOXA11 is not avaliable on ENCORE database.






NO known proteins are bound to HOXA11 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for HOXA11 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HOXA11 is not available on ENCORE database.

  • 3 RBPs can affect the levels of HOXA11.  








The Knockdown/knockout RNA-Seq assay for HOXA11 is not available on ENCORE database.





3 RBPs can affect the gene expression of HOXA11 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HOXA11ENSG00000005073.59.631300.0000099999.999902.501101.77700HepG2CNOT7
HOXA11ENSG00000005073.59.509600.664903.838102.159601.31920HepG2HNRNPM
HOXA11ENSG00000005073.519.818202.862502.791402.566302.06250HepG2RBM22
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HOXA11 is not available on ENCORE database.






No RBPs affect the alternative splcing events of HOXA11 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HOXA11 is not avaliable on ENCORE database.