HIST1H4C

General Information

Gene Name       : HIST1H4C
Gene ID             : ENSG00000197061.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HIST1H4C)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HIST1H4CENSG00000197061.40.001.040.52ENCSR000AEF
HepG2HIST1H4CENSG00000197061.40.440.380.41ENCSR985KAT
K562HIST1H4CENSG00000197061.41.721.241.48ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HIST1H4C is not avaliable on ENCORE database.



Proteins bound to RNA
  • HIST1H4C RNA is bound by 9 proteins.  







eCLIP assay for HIST1H4C is not avaliable on ENCORE database.





9 proteins are bound to HIST1H4C RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62610444826104500+3'-UTR,CDS6.90516400.00000K562SLBP
chr62610417326104243+5'-UTR,CDS4.2368111.35957K562EIF3G
chr62610436126104414+CDS3.0581110.96887HepG2G3BP1
chr62610443326104470+CDS3.4541150.52644K562YBX3
chr62610419526104249+CDS4.68453400.00000K562SLBP
chr62610441026104429+CDS3.2814419.58183K562YBX3
chr62610437026104418+CDS5.50210400.00000K562SLBP
chr62610438026104395+CDS6.1745639.83633K562RPS3
chr62610428126104324+CDS3.3389013.37705K562SND1
chr62610419526104251+CDS4.369253.41711K562DROSHA
chr62610441426104481+CDS3.3451744.98758K562PUM2
chr62610429326104361+CDS3.3622113.51574HepG2G3BP1
chr62610418126104257+CDS3.280343.88038HepG2DDX3X
chr62610420226104249+CDS4.8160220.88813HepG2RPS3
chr62610427226104324+CDS7.31531400.00000K562RPS3
chr62610418226104273+CDS3.59605400.00000K562DDX3X
chr62610428326104314+CDS6.0655412.82347HepG2RPS3
chr62610420126104249+CDS6.92905400.00000K562RPS3
chr62610438726104403+CDS3.630234.12910K562DROSHA
chr62610429126104313+CDS5.2656652.20035K562SLBP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HIST1H4C is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HIST1H4C is not available on ENCORE database.

  • 1 RBPs can affect the levels of HIST1H4C.  








The Knockdown/knockout RNA-Seq assay for HIST1H4C is not available on ENCORE database.





1 RBPs can affect the gene expression of HIST1H4C :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HIST1H4CENSG00000197061.321.822101.157404.236804.719604.03490K562PUS1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HIST1H4C is not available on ENCORE database.






No RBPs affect the alternative splcing events of HIST1H4C on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HIST1H4C is not avaliable on ENCORE database.