HIST1H2AA

General Information

Gene Name       : HIST1H2AA
Gene ID             : ENSG00000164508.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HIST1H2AA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HIST1H2AAENSG00000164508.40.000.000.00ENCSR000AEF
HepG2HIST1H2AAENSG00000164508.40.000.000.00ENCSR985KAT
K562HIST1H2AAENSG00000164508.40.440.000.22ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HIST1H2AA is not avaliable on ENCORE database.



Proteins bound to RNA
  • HIST1H2AA RNA is bound by 2 proteins.  







eCLIP assay for HIST1H2AA is not avaliable on ENCORE database.





2 proteins are bound to HIST1H2AA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62572629125726342-3'-UTR6.4379713.08465K562SLBP
chr62572639925726461-CDS3.243175.51805K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HIST1H2AA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HIST1H2AA is not available on ENCORE database.

  • 1 RBPs can affect the levels of HIST1H2AA.  








The Knockdown/knockout RNA-Seq assay for HIST1H2AA is not available on ENCORE database.





1 RBPs can affect the gene expression of HIST1H2AA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HIST1H2AAENSG00000164508.316.940502.542402.736102.357101.80030K562HNRNPC
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HIST1H2AA is not available on ENCORE database.






No RBPs affect the alternative splcing events of HIST1H2AA on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HIST1H2AA is not avaliable on ENCORE database.