CTC-338M12.2

General Information

Gene Name       : CTC-338M12.2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CTC-338M12.2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CTC-338M12.2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CTC-338M12.2 RNA is bound by 3 proteins.  







eCLIP assay for CTC-338M12.2 is not avaliable on ENCORE database.





3 proteins are bound to CTC-338M12.2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5180618694180618705-intron-Distal3.9800669.50993K562HNRNPM
chr5180618751180618766-intron-Distal4.9050618.14882K562SSB
chr5180618672180618694-intron-Distal3.9861369.85007K562HNRNPM
chr5180618734180618766-intron-Distal4.3152317.75002K562HNRNPM
chr5180618672180618702-intron-Distal4.27158400.00000K562NSUN2
chr5180618724180618734-intron-Distal3.9529518.77265K562HNRNPM
chr5180618720180618767-intron-Distal3.641493.18523HepG2SSB
chr5180618725180618731-intron-Distal4.3279014.16508K562SSB
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CTC-338M12.2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CTC-338M12.2 is not available on ENCORE database.

  • No RBPs affect the gene expression of CTC-338M12.2 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for CTC-338M12.2 is not available on ENCORE database.






No RBPs affect the gene expression of CTC-338M12.2 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for CTC-338M12.2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CTC-338M12.2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CTC-338M12.2 is not avaliable on ENCORE database.