RP11-204L24.2

General Information

Gene Name       : RP11-204L24.2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-204L24.2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-204L24.2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-204L24.2 RNA is bound by 4 proteins.  







eCLIP assay for RP11-204L24.2 is not avaliable on ENCORE database.





4 proteins are bound to RP11-204L24.2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2122288492122288497+intron-Distal3.98583400.00000K562GEMIN5
chr2122288519122288531+intron-Distal3.61358400.00000K562PRPF8
chr2122288570122288596+intron-Distal4.53038400.00000K562GEMIN5
chr2122288539122288543+intron-Distal3.7526060.57808K562PRPF8
chr2122288535122288539+intron-Distal4.15171400.00000K562PRPF8
chr2122288531122288537+intron-Distal3.60588400.00000HepG2EFTUD2
chr2122288545122288570+intron-Distal3.84368400.00000K562GEMIN5
chr2122288514122288522+intron-Distal3.20256400.00000HepG2PRPF8
chr2122288459122288492+intron-Distal3.20218400.00000HepG2PRPF8
chr2122288522122288558+intron-Distal3.17505400.00000HepG2PRPF8
chr2122288543122288558+intron-Distal4.3673062.56404K562PRPF8
chr2122288466122288492+intron-Distal4.24203400.00000K562GEMIN5
chr2122288522122288538+intron-Distal3.35370400.00000K562GEMIN5
chr2122288596122288602+intron-Distal8.8936247.47653K562GEMIN5
chr2122288456122288459+intron-Distal3.55702400.00000HepG2PRPF8
chr2122288531122288535+intron-Distal3.84941400.00000K562PRPF8
chr2122288497122288510+intron-Distal3.02018400.00000K562GEMIN5
chr2122288502122288531+intron-Distal3.34035400.00000HepG2EFTUD2
chr2122288580122288586+intron-Distal3.9727017.03398HepG2SMNDC1
chr2122288499122288502+intron-Distal3.28774400.00000HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-204L24.2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-204L24.2 is not available on ENCORE database.

  • 3 RBPs can affect the levels of RP11-204L24.2.  








The Knockdown/knockout RNA-Seq assay for RP11-204L24.2 is not available on ENCORE database.





3 RBPs can affect the gene expression of RP11-204L24.2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-204L24.2ENSG00000265451.120.891703.625602.526502.315101.82410HepG2AKAP1
RP11-204L24.2ENSG00000265451.111.654400.0000099999.999903.043902.30680HepG2RAVER1
RP11-204L24.2ENSG00000265451.120.887202.684402.959803.396802.74470HepG2UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-204L24.2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-204L24.2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-204L24.2 is not avaliable on ENCORE database.